SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001079670
Gene Symbol: CAB39L
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.49368244G>C COSN1611443 RK099_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-578 tgaactACAAGAAtg CUUCUUGU m7b Created HHFCT_40691_cluster-6172_1_8
hsa-miR-643 tgaacTACAAGaatg ACUUGUAU m6b Created HHFCT_40691_cluster-6172_1_8
hsa-miR-4703-3p tgAACTACAagaatg UGUAGUUG m7a (m6a->m7a) HHFCT_40691_cluster-6172_1_8
hsa-miR-4659b-3p tgaactAGAAGAAtg UUUCUUCU m7b Disrupted HHFCT_40691_cluster-6172_1_8
hsa-miR-4659a-3p tgaactAGAAGAAtg UUUCUUCU m7b Disrupted HHFCT_40691_cluster-6172_1_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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