SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0045009
Gene Symbol: BRIP1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.61686049G>A COSM4068421 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2116-5p cataAAGAACagaac GGUUCUUA m6b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-22-5p cataAAGAACagaac AGUUCUUC m6b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-26b-3p cataaAGAACAGaac CCUGUUCU m7b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-4652-3p cataaagAACAGAAc GUUCUGUU m7b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-4677-5p cataAAGAACAgaac UUGUUCUU m7b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-4743-3p cataaagGACAGAAc UUUCUGUC m7b Disrupted HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-676-3p cataaAGGACAGaac CUGUCCUA m7a Disrupted HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-6888-3p cataaagGACAGAac AUCUGUCU m6b Disrupted HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-2116-5p cataAAGAACagaac GGUUCUUA m6b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-22-5p cataAAGAACagaac AGUUCUUC m6b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-26b-3p cataaAGAACAGaac CCUGUUCU m7b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-4652-3p cataaagAACAGAAc GUUCUGUU m7b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-4677-5p cataAAGAACAgaac UUGUUCUU m7b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-4743-3p cataaagGACAGAAc UUUCUGUC m7b Disrupted HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-676-3p cataaAGGACAGaac CUGUCCUA m7a Disrupted HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-6888-3p cataaagGACAGAac AUCUGUCU m6b Disrupted HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756

Mutation Mutation ID Sample Name Cancer Type
chr17:g.61686041C>G COSM4579942 07-P8041 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-182-3p acAGAACCAatatac UGGUUCUA m7a (m7a->m6a) HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-218-1-3p acaGAACCAatatac AUGGUUCC m6b Disrupted HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-597-3p acAGAACCAatatac UGGUUCUC m7a (m7a->m6a) HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-6074 acagaacGAATATac GAUAUUCA m6b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-659-3p acaGAACCAAtatac CUUGGUUC m7b Disrupted HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-152-5p aCAGAACCaatatac AGGUUCUG m7b Disrupted HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-182-3p acAGAACCAatatac UGGUUCUA m7a (m7a->m6a) HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-218-1-3p acaGAACCAatatac AUGGUUCC m6b Disrupted HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-597-3p acAGAACCAatatac UGGUUCUC m7a (m7a->m6a) HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-6074 acagaacGAATATac GAUAUUCA m6b Created HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756
hsa-miR-659-3p acaGAACCAAtatac CUUGGUUC m7b Disrupted HHKTA_20091_NM_032043|2826|2865|3.6345070483476|0.331529480268756

Mutation Mutation ID Sample Name Cancer Type
chr17:g.61685892A>C COSM171681 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135b-3p tgtCCTACAattatt AUGUAGGG m6b Created HPCB3_9915_G13585.1_59763244
hsa-miR-4775 tgtcctAAAATTAtt UUAAUUUU m7b Disrupted HPCB3_9915_G13585.1_59763244
hsa-miR-590-3p tgtccTAAAATTAtt UAAUUUUA m8a Disrupted HPCB3_9915_G13585.1_59763244
hsa-miR-651-5p tgTCCTAAAattatt UUUAGGAU m7a (m7a->m6a) HPCB3_9915_G13585.1_59763244
hsa-miR-8065 tgTCCTACAattatt UGUAGGAA m7a (m6a->m7a) HPCB3_9915_G13585.1_59763244
hsa-miR-135b-3p tgtCCTACAattatt AUGUAGGG m6b Created HPSD1_4418_G5691.1_59763228
hsa-miR-4775 tgtcctAAAATTAtt UUAAUUUU m7b Disrupted HPSD1_4418_G5691.1_59763228
hsa-miR-590-3p tgtccTAAAATTAtt UAAUUUUA m8a Disrupted HPSD1_4418_G5691.1_59763228
hsa-miR-651-5p tgTCCTAAAattatt UUUAGGAU m7a (m7a->m6a) HPSD1_4418_G5691.1_59763228
hsa-miR-8065 tgTCCTACAattatt UGUAGGAA m7a (m6a->m7a) HPSD1_4418_G5691.1_59763228
hsa-miR-135b-3p tgtCCTACAattatt AUGUAGGG m6b Created HPSEF_10333_G12381.1_59763238
hsa-miR-4775 tgtcctAAAATTAtt UUAAUUUU m7b Disrupted HPSEF_10333_G12381.1_59763238
hsa-miR-590-3p tgtccTAAAATTAtt UAAUUUUA m8a Disrupted HPSEF_10333_G12381.1_59763238
hsa-miR-651-5p tgTCCTAAAattatt UUUAGGAU m7a (m7a->m6a) HPSEF_10333_G12381.1_59763238
hsa-miR-8065 tgTCCTACAattatt UGUAGGAA m7a (m6a->m7a) HPSEF_10333_G12381.1_59763238

Mutation Mutation ID Sample Name Cancer Type
chr17:g.61685874C>T COSM3520423 TCGA-EE-A2MJ-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HHFCT_64088_cluster-10488_3_8
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HHFCT_64088_cluster-10488_3_8
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HHFCT_64088_cluster-10488_3_8
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HHFCT_64088_cluster-10488_3_8
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HHFCT_64088_cluster-10488_3_8
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPCB3_9915_G13585.1_59763244
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPCB3_9915_G13585.1_59763244
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPCB3_9915_G13585.1_59763244
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPCB3_9915_G13585.1_59763244
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPCB3_9915_G13585.1_59763244
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPSD1_4418_G5691.1_59763228
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPSD1_4418_G5691.1_59763228
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPSD1_4418_G5691.1_59763228
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPSD1_4418_G5691.1_59763228
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPSD1_4418_G5691.1_59763228
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPSD3_4580_G6051.1_59763249
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPSD3_4580_G6051.1_59763249
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPSD3_4580_G6051.1_59763249
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPSD3_4580_G6051.1_59763249
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPSD3_4580_G6051.1_59763249
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPSEF_10333_G12381.1_59763238
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPSEF_10333_G12381.1_59763238
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPSEF_10333_G12381.1_59763238
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPSEF_10333_G12381.1_59763238
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPSEF_10333_G12381.1_59763238
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPSLB_3442_G4176.1_59763222
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPSLB_3442_G4176.1_59763222
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPSLB_3442_G4176.1_59763222
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPSLB_3442_G4176.1_59763222
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPSLB_3442_G4176.1_59763222
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPSLC_8874_G10475.1_59763223
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPSLC_8874_G10475.1_59763223
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPSLC_8874_G10475.1_59763223
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPSLC_8874_G10475.1_59763223
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPSLC_8874_G10475.1_59763223
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HHFCT_64088_cluster-10488_3_8
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HHFCT_64088_cluster-10488_3_8
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HHFCT_64088_cluster-10488_3_8
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HHFCT_64088_cluster-10488_3_8
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HHFCT_64088_cluster-10488_3_8
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPCB3_9915_G13585.1_59763244
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPCB3_9915_G13585.1_59763244
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPCB3_9915_G13585.1_59763244
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPCB3_9915_G13585.1_59763244
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPCB3_9915_G13585.1_59763244
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPSD1_4418_G5691.1_59763228
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPSD1_4418_G5691.1_59763228
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPSD1_4418_G5691.1_59763228
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPSD1_4418_G5691.1_59763228
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPSD1_4418_G5691.1_59763228
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPSD3_4580_G6051.1_59763249
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPSD3_4580_G6051.1_59763249
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPSD3_4580_G6051.1_59763249
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPSD3_4580_G6051.1_59763249
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPSD3_4580_G6051.1_59763249
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPSEF_10333_G12381.1_59763238
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPSEF_10333_G12381.1_59763238
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPSEF_10333_G12381.1_59763238
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPSEF_10333_G12381.1_59763238
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPSEF_10333_G12381.1_59763238
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPSLB_3442_G4176.1_59763222
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPSLB_3442_G4176.1_59763222
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPSLB_3442_G4176.1_59763222
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPSLB_3442_G4176.1_59763222
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPSLB_3442_G4176.1_59763222
hsa-let-7d-5p aaaaattTACCTCTa AGAGGUAG m7a Created HPSLC_8874_G10475.1_59763223
hsa-miR-202-3p aaaaattTACCTCTa AGAGGUAU m7a Created HPSLC_8874_G10475.1_59763223
hsa-miR-3606-3p aaAAATTTacctcta AAAAUUUC m6b Created HPSLC_8874_G10475.1_59763223
hsa-miR-4458 aaaaattTACCTCTa AGAGGUAG m7a Created HPSLC_8874_G10475.1_59763223
hsa-miR-7854-3p aaaaatTCACCTCta UGAGGUGA m7b Disrupted HPSLC_8874_G10475.1_59763223

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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