SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0008673
Gene Symbol: BRCA1
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.43104922G>TG COSM4603913 2011-2374:2012-1302-T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3065-5p tcaacTTTGTTGAaga UCAACAAA m8a Created HHFCT_63217_cluster-10350_28_17
hsa-miR-421 tcaactTGTTGAaga AUCAACAG m6b Disrupted HHFCT_63217_cluster-10350_28_17
hsa-miR-495-3p tcaacTTTGTTgaaga AAACAAAC m6b Created HHFCT_63217_cluster-10350_28_17
hsa-miR-5688 tcaacTTTGTTgaaga UAACAAAC m6b Created HHFCT_63217_cluster-10350_28_17
hsa-miR-676-5p tcaacttGTTGAAGa UCUUCAAC m7b Disrupted HHFCT_63217_cluster-10350_28_17
hsa-miR-7-1-3p tcaacTTTGTTGaaga CAACAAAU m7a Created HHFCT_63217_cluster-10350_28_17
hsa-miR-7159-5p tcaacTTGTTGAAga UUCAACAA m8a Disrupted HHFCT_63217_cluster-10350_28_17
hsa-miR-7-2-3p tcaacTTTGTTGaaga CAACAAAU m7a Created HHFCT_63217_cluster-10350_28_17
hsa-miR-3065-5p tcaacTTTGTTGAaga UCAACAAA m8a Created HHFCT_63217_cluster-10350_28_17
hsa-miR-421 tcaactTGTTGAaga AUCAACAG m6b Disrupted HHFCT_63217_cluster-10350_28_17
hsa-miR-495-3p tcaacTTTGTTgaaga AAACAAAC m6b Created HHFCT_63217_cluster-10350_28_17
hsa-miR-5688 tcaacTTTGTTgaaga UAACAAAC m6b Created HHFCT_63217_cluster-10350_28_17
hsa-miR-676-5p tcaacttGTTGAAGa UCUUCAAC m7b Disrupted HHFCT_63217_cluster-10350_28_17
hsa-miR-7-1-3p tcaacTTTGTTGaaga CAACAAAU m7a Created HHFCT_63217_cluster-10350_28_17
hsa-miR-7159-5p tcaacTTGTTGAAga UUCAACAA m8a Disrupted HHFCT_63217_cluster-10350_28_17
hsa-miR-7-2-3p tcaacTTTGTTGaaga CAACAAAU m7a Created HHFCT_63217_cluster-10350_28_17

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser