SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001003398
Gene Symbol: BICD1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.32377595C>T COSM238963 WA12 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3978 cgcccCTTTCCACtg GUGGAAAG m8a Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-423-5p cGCCCCTCtccactg UGAGGGGC m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-5192 cgcccCTCTCCactg AGGAGAGU m6b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-5681a cgcCCCTTTCcactg AGAAAGGG m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231

Mutation Mutation ID Sample Name Cancer Type
chr12:g.32377589G>A COSM166457 AML12 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia_therapy_related]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106b-3p cCAGTGCGcccctct CCGCACUG m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-1914-3p ccagtgcACCCCTCt GGAGGGGU m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-3184-5p ccagtgcGCCCCTCt UGAGGGGC m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-342-5p ccagtGCACCCCTct AGGGGUGC m8a Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-423-5p ccagtgcGCCCCTCt UGAGGGGC m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-4664-5p ccagtGCACCCCtct UGGGGUGC m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-5194 ccagtgcACCCCTCt UGAGGGGU m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6722-5p ccaGTGCGCCcctct AGGCGCAC m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6738-5p ccagtgcACCCCTCt CGAGGGGU m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6782-5p ccagtgCACCCCTct UAGGGGUG m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231

Mutation Mutation ID Sample Name Cancer Type
chr12:g.32377588C>T COSM185640 T2269 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106b-3p ccCAGTGCGcccctc CCGCACUG m7b (m7b->m6b) HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-4688 cccagtgTGCCCCTc UAGGGGCA m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6722-5p cccaGTGCGCCcctc AGGCGCAC m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6743-5p cccagtgTGCCCCTc AAGGGGCA m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6757-3p cCCAGTGTgcccctc AACACUGG m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-8064 cccAGTGTGCccctc AGCACACU m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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