SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0058053
Gene Symbol: BARD1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.214769304A>G COSM209927 TCGA-AA-3864-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3910 gcgacATGCCTTctg AAAGGCAU m7b Created HPTA3_11586_G18292.1_215634025
hsa-miR-605-3p gcgacaTGCCTTCTg AGAAGGCA m8a Created HPTA3_11586_G18292.1_215634025
hsa-miR-3910 gcgacATGCCTTctg AAAGGCAU m7b Created HPTK1_18153_G21635.1_215634025
hsa-miR-605-3p gcgacaTGCCTTCTg AGAAGGCA m8a Created HPTK1_18153_G21635.1_215634025

Mutation Mutation ID Sample Name Cancer Type
chr2:g.214769288C>T COSM1691960 YUKLAB [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4678 tgAATACCTTttaca AAGGUAUU m8a Disrupted HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-548l tgaATACTTTTtaca AAAAGUAU m8a Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-548m tgaaTACCTTTtaca CAAAGGUA m7b Disrupted HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-548n tgaaTACTTTTtaca CAAAAGUA m7b Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-4678 tgAATACCTTttaca AAGGUAUU m8a Disrupted HPTA3_11586_G18292.1_215634025
hsa-miR-548l tgaATACTTTTtaca AAAAGUAU m8a Created HPTA3_11586_G18292.1_215634025
hsa-miR-548m tgaaTACCTTTtaca CAAAGGUA m7b Disrupted HPTA3_11586_G18292.1_215634025
hsa-miR-548n tgaaTACTTTTtaca CAAAAGUA m7b Created HPTA3_11586_G18292.1_215634025
hsa-miR-4678 tgAATACCTTttaca AAGGUAUU m8a Disrupted HPTK1_18153_G21635.1_215634025
hsa-miR-548l tgaATACTTTTtaca AAAAGUAU m8a Created HPTK1_18153_G21635.1_215634025
hsa-miR-548m tgaaTACCTTTtaca CAAAGGUA m7b Disrupted HPTK1_18153_G21635.1_215634025
hsa-miR-548n tgaaTACTTTTtaca CAAAAGUA m7b Created HPTK1_18153_G21635.1_215634025
hsa-miR-4678 tgAATACCTTttaca AAGGUAUU m8a Disrupted HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-548l tgaATACTTTTtaca AAAAGUAU m8a Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-548m tgaaTACCTTTtaca CAAAGGUA m7b Disrupted HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-548n tgaaTACTTTTtaca CAAAAGUA m7b Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-4678 tgAATACCTTttaca AAGGUAUU m8a Disrupted HPTA3_11586_G18292.1_215634025
hsa-miR-548l tgaATACTTTTtaca AAAAGUAU m8a Created HPTA3_11586_G18292.1_215634025
hsa-miR-548m tgaaTACCTTTtaca CAAAGGUA m7b Disrupted HPTA3_11586_G18292.1_215634025
hsa-miR-548n tgaaTACTTTTtaca CAAAAGUA m7b Created HPTA3_11586_G18292.1_215634025
hsa-miR-4678 tgAATACCTTttaca AAGGUAUU m8a Disrupted HPTK1_18153_G21635.1_215634025
hsa-miR-548l tgaATACTTTTtaca AAAAGUAU m8a Created HPTK1_18153_G21635.1_215634025
hsa-miR-548m tgaaTACCTTTtaca CAAAGGUA m7b Disrupted HPTK1_18153_G21635.1_215634025
hsa-miR-548n tgaaTACTTTTtaca CAAAAGUA m7b Created HPTK1_18153_G21635.1_215634025

Mutation Mutation ID Sample Name Cancer Type
chr2:g.214769271T>G COSM141016 1604875 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-188-5p atggAAGGGATccaa CAUCCCUU m7b Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-6734-3p atGGAAGGGatccaa CCCUUCCC m7a (m6a->m7a) HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-6866-3p atggAAGGGATCcaa GAUCCCUU m8a Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752

Mutation Mutation ID Sample Name Cancer Type
chr2:g.214769261G>A COSM243168 P03-1906 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302b-5p tccaaatGTTAAAGa ACUUUAAC m7b Disrupted HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-302c-5p tccaaATGTTAAAga UUUAACAU m8a Disrupted HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-302d-5p tccaaatGTTAAAGa ACUUUAAC m7b Disrupted HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-3143 tccaAATGTTAaaga AUAACAUU m7b Disrupted HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-543 tccaAATGTTaaaga AAACAUUC m6b Disrupted HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-889-3p tccaaATATTAAaga UUAAUAUC m7a Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752

Mutation Mutation ID Sample Name Cancer Type
chr2:g.214769254A>T COSM4764555 pfg424T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302b-5p GTTAAAGTccatgct ACUUUAAC m8a Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-302d-5p GTTAAAGTccatgct ACUUUAAC m8a Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-5009-5p gttaAAGTCCAtgct UUGGACUU m7b Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-8058 gttaAAGTCCAtgct CUGGACUU m7b Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-302b-5p GTTAAAGTccatgct ACUUUAAC m8a Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-302d-5p GTTAAAGTccatgct ACUUUAAC m8a Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-5009-5p gttaAAGTCCAtgct UUGGACUU m7b Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752
hsa-miR-8058 gttaAAGTCCAtgct CUGGACUU m7b Created HHKTA_28456_NM_000465|1468|1507|2.59607646310543|0.195924782056752

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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