SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_104216
Gene Symbol: BARD1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.214738591A>C COSN14585163 8067507 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622b-5p aaCCATGCCcatcat AGGCAUGG m7b (m6b->m7b) HHFCT_85895_uc002veu.2_7_12
hsa-miR-3945 aaccATGCCCatcat AGGGCAUA m6b Created HHFCT_85895_uc002veu.2_7_12
hsa-miR-4253 aacCATGCCCatcat AGGGCAUG m7b Created HHFCT_85895_uc002veu.2_7_12
hsa-miR-6862-5p aacCATGCCCatcat CGGGCAUG m7b Created HHFCT_85895_uc002veu.2_7_12
hsa-miR-8069 aaccatgACCATCat GGAUGGUU m6b Disrupted HHFCT_85895_uc002veu.2_7_12
hsa-miR-3622b-5p aaCCATGCCcatcat AGGCAUGG m7b (m6b->m7b) HPCB1_24085_G30460.1_215603318
hsa-miR-3945 aaccATGCCCatcat AGGGCAUA m6b Created HPCB1_24085_G30460.1_215603318
hsa-miR-4253 aacCATGCCCatcat AGGGCAUG m7b Created HPCB1_24085_G30460.1_215603318
hsa-miR-6862-5p aacCATGCCCatcat CGGGCAUG m7b Created HPCB1_24085_G30460.1_215603318
hsa-miR-8069 aaccatgACCATCat GGAUGGUU m6b Disrupted HPCB1_24085_G30460.1_215603318

Mutation Mutation ID Sample Name Cancer Type
chr2:g.214728840G>A COSM1669728 HCT15 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6814-3p ataccATGCGAGacc ACUCGCAU m7b Disrupted HHFCT_85892_uc002veu.2_4_19
hsa-miR-6872-5p ataccATGCGAGAcc UCUCGCAU m8a Disrupted HHFCT_85892_uc002veu.2_4_19
hsa-miR-6814-3p ataccATGCGAGacc ACUCGCAU m7b Disrupted HHFCT_85892_uc002veu.2_4_19
hsa-miR-6872-5p ataccATGCGAGAcc UCUCGCAU m8a Disrupted HHFCT_85892_uc002veu.2_4_19

Mutation Mutation ID Sample Name Cancer Type
chr2:g.214728831G>A COSM4764553 pfg081T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-193a-5p gAGACCCAattctga UGGGUCUU m7a Created HHFCT_85892_uc002veu.2_4_19

Mutation Mutation ID Sample Name Cancer Type
chr2:g.214728786T>G COSM4665180 T3255 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-329-3p tgaagatGTGTGTaa AACACACC m6b Created HHFCT_85891_uc002veu.2_3_7
hsa-miR-362-3p tgaagatGTGTGTaa AACACACC m6b Created HHFCT_85891_uc002veu.2_3_7
hsa-miR-3941 tgaagatGTGTGTAa UUACACAC m7b Created HHFCT_85891_uc002veu.2_3_7
hsa-miR-4719 tgaagATTTGTGtaa UCACAAAU m7b Disrupted HHFCT_85891_uc002veu.2_3_7
hsa-miR-4762-5p tgaAGATTTGtgtaa CCAAAUCU m7b Disrupted HHFCT_85891_uc002veu.2_3_7
hsa-miR-4801 tgaagatTTGTGTAa UACACAAG m7a Disrupted HHFCT_85891_uc002veu.2_3_7
hsa-miR-8485 tgaagaTGTGTGTaa CACACACA m7b Created HHFCT_85891_uc002veu.2_3_7
hsa-miR-329-3p tgaagatGTGTGTaa AACACACC m6b Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-362-3p tgaagatGTGTGTaa AACACACC m6b Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-3941 tgaagatGTGTGTAa UUACACAC m7b Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-4719 tgaagATTTGTGtaa UCACAAAU m7b Disrupted HHFKP_79336_uc002veu.2_2_12
hsa-miR-4762-5p tgaAGATTTGtgtaa CCAAAUCU m7b Disrupted HHFKP_79336_uc002veu.2_2_12
hsa-miR-4801 tgaagatTTGTGTAa UACACAAG m7a Disrupted HHFKP_79336_uc002veu.2_2_12
hsa-miR-8485 tgaagaTGTGTGTaa CACACACA m7b Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-329-3p tgaagatGTGTGTaa AACACACC m6b Created HHFCT_85891_uc002veu.2_3_7
hsa-miR-362-3p tgaagatGTGTGTaa AACACACC m6b Created HHFCT_85891_uc002veu.2_3_7
hsa-miR-3941 tgaagatGTGTGTAa UUACACAC m7b Created HHFCT_85891_uc002veu.2_3_7
hsa-miR-4719 tgaagATTTGTGtaa UCACAAAU m7b Disrupted HHFCT_85891_uc002veu.2_3_7
hsa-miR-4762-5p tgaAGATTTGtgtaa CCAAAUCU m7b Disrupted HHFCT_85891_uc002veu.2_3_7
hsa-miR-4801 tgaagatTTGTGTAa UACACAAG m7a Disrupted HHFCT_85891_uc002veu.2_3_7
hsa-miR-8485 tgaagaTGTGTGTaa CACACACA m7b Created HHFCT_85891_uc002veu.2_3_7
hsa-miR-329-3p tgaagatGTGTGTaa AACACACC m6b Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-362-3p tgaagatGTGTGTaa AACACACC m6b Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-3941 tgaagatGTGTGTAa UUACACAC m7b Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-4719 tgaagATTTGTGtaa UCACAAAU m7b Disrupted HHFKP_79336_uc002veu.2_2_12
hsa-miR-4762-5p tgaAGATTTGtgtaa CCAAAUCU m7b Disrupted HHFKP_79336_uc002veu.2_2_12
hsa-miR-4801 tgaagatTTGTGTAa UACACAAG m7a Disrupted HHFKP_79336_uc002veu.2_2_12
hsa-miR-8485 tgaagaTGTGTGTaa CACACACA m7b Created HHFKP_79336_uc002veu.2_2_12

Mutation Mutation ID Sample Name Cancer Type
chr2:g.214728780A>G COSM4090991 TCGA-HU-A4GQ-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34b-3p tttgtGTGATTatca CAAUCACU m6b Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-377-3p ttTGTGTGATtatca AUCACACA m8a Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-466 ttTGTGTAattatca AUACACAU m6b Disrupted HHFKP_79336_uc002veu.2_2_12
hsa-miR-4731-3p tTTGTGTGattatca CACACAAG m7a Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-34b-3p tttgtGTGATTatca CAAUCACU m6b Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-377-3p ttTGTGTGATtatca AUCACACA m8a Created HHFKP_79336_uc002veu.2_2_12
hsa-miR-466 ttTGTGTAattatca AUACACAU m6b Disrupted HHFKP_79336_uc002veu.2_2_12
hsa-miR-4731-3p tTTGTGTGattatca CACACAAG m7a Created HHFKP_79336_uc002veu.2_2_12

Mutation Mutation ID Sample Name Cancer Type
chr2:g.214728689C>T COSM4882490 OSCC-GB_01060111 [upper_aerodigestive_tract][mouth][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3125 ttgcTTCCTCTtgac UAGAGGAA m7b Disrupted HHFKP_79335_uc002veu.2_1_15
hsa-miR-3185 ttgCTTCTTCTtgac AGAAGAAG m8a Created HHFKP_79335_uc002veu.2_1_15
hsa-miR-3916 ttgcTTCCTCTTgac AAGAGGAA m8a Disrupted HHFKP_79335_uc002veu.2_1_15
hsa-miR-6828-5p tTGCTTCCTcttgac AGGAAGCA m8a (m8a->m7a) HHFKP_79335_uc002veu.2_1_15
hsa-miR-6859-5p ttgcTTCCTCTtgac GAGAGGAA m7b Disrupted HHFKP_79335_uc002veu.2_1_15
hsa-miR-3125 ttgcTTCCTCTtgac UAGAGGAA m7b Disrupted HHFKP_79335_uc002veu.2_1_15
hsa-miR-3185 ttgCTTCTTCTtgac AGAAGAAG m8a Created HHFKP_79335_uc002veu.2_1_15
hsa-miR-3916 ttgcTTCCTCTTgac AAGAGGAA m8a Disrupted HHFKP_79335_uc002veu.2_1_15
hsa-miR-6828-5p tTGCTTCCTcttgac AGGAAGCA m8a (m8a->m7a) HHFKP_79335_uc002veu.2_1_15
hsa-miR-6859-5p ttgcTTCCTCTtgac GAGAGGAA m7b Disrupted HHFKP_79335_uc002veu.2_1_15

Mutation Mutation ID Sample Name Cancer Type
chr2:g.214728017C>T COSN6168620 RK215_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7109-3p ctAGGCTTatggtac CAAGCCUC m6b Created HPSD1_5800_G7505.1_215592754
hsa-miR-7153-3p ctaggctCATGGTac CACCAUGG m6b Disrupted HPSD1_5800_G7505.1_215592754
hsa-miR-7109-3p ctAGGCTTatggtac CAAGCCUC m6b Created HPSEF_13564_G16319.1_215592739
hsa-miR-7153-3p ctaggctCATGGTac CACCAUGG m6b Disrupted HPSEF_13564_G16319.1_215592739

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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