SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_004655
Gene Symbol: AXIN2
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.65537650C>T COSM3749411 TCGA-CM-6680-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4721 atAGCCCTCgctccc UGAGGGCU m7b (m6b->m7b) HHFCT_64351_cluster-10518_6_8
hsa-miR-4781-5p atagcCCCCGCTccc UAGCGGGG m7b Disrupted HHFCT_64351_cluster-10518_6_8
hsa-miR-6846-5p atAGCCCCCgctccc UGGGGGCU m7b (m7b->m6b) HHFCT_64351_cluster-10518_6_8
hsa-miR-6848-5p atAGCCCCCgctccc UGGGGGCU m7b (m7b->m6b) HHFCT_64351_cluster-10518_6_8

Mutation Mutation ID Sample Name Cancer Type
chr17:g.65537642G>A COSM4664808 T2420 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1233-5p cgCTCCCACTccccg AGUGGGAG m8a Created HHFCT_64351_cluster-10518_6_8
hsa-miR-1343-5p cgctcccGCTCCCCg UGGGGAGC m7b Disrupted HHFCT_64351_cluster-10518_6_8
hsa-miR-4481 cgctCCCACTCCccg GGAGUGGG m8a Created HHFCT_64351_cluster-10518_6_8
hsa-miR-4745-5p cgctCCCACTCcccg UGAGUGGG m7b Created HHFCT_64351_cluster-10518_6_8
hsa-miR-6090 cgctccCGCTCCCCg GGGGAGCG m8a Disrupted HHFCT_64351_cluster-10518_6_8
hsa-miR-6778-5p cgCTCCCACTccccg AGUGGGAG m8a Created HHFCT_64351_cluster-10518_6_8
hsa-miR-939-5p cgctcccGCTCCCCg UGGGGAGC m7b Disrupted HHFCT_64351_cluster-10518_6_8

Mutation Mutation ID Sample Name Cancer Type
chr17:g.65529295C>T COSN5419347 RK156_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-425-5p catgttGTGTCATca AAUGACAC m7b Created HHFKP_61024_cluster-10518_3_34
hsa-miR-5003-5p caTGTTGTGtcatca UCACAACA m7b (m6b->m7b) HHFKP_61024_cluster-10518_3_34
hsa-miR-642a-3p catgtTGTGTCatca AGACACAU m6b Created HHFKP_61024_cluster-10518_3_34
hsa-miR-642b-3p catgtTGTGTCatca AGACACAU m6b Created HHFKP_61024_cluster-10518_3_34

Mutation Mutation ID Sample Name Cancer Type
chr17:g.65528611A>G COSN1725993 RK096_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3529-3p aataaTTGTTGTaat AACAACAA m7b Created HHKTA_42181_NM_004655|4158|4197|1.8172535241738|0.139402890691835

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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