SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007026
Gene Symbol: ATN1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.6936197C>G COSM549672 TCGA-44-2662-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6734-5p gaCCCCTCAAcaatg UUGAGGGG m8a Disrupted HPSEF_4829_G5772.1_7045365
hsa-miR-5194 gACCCCTCAacaatg UGAGGGGU m8a (m8a->m7a) HPSEF_4829_G5772.1_7045365
hsa-miR-653-5p gaccccTCAACAatg GUGUUGAA m6b Disrupted HPSEF_4829_G5772.1_7045365
hsa-miR-6834-5p gacCCCTCAacaatg GUGAGGGA m6b Disrupted HPSEF_4829_G5772.1_7045365
hsa-miR-1226-5p gacCCCTCAacaatg GUGAGGGC m6b Disrupted HPSEF_4829_G5772.1_7045365
hsa-miR-3127-5p gacCCCTGAacaatg AUCAGGGC m6b Created HPSEF_4829_G5772.1_7045365
hsa-miR-3184-5p gaCCCCTCAacaatg UGAGGGGC m7a (m7a->m6a) HPSEF_4829_G5772.1_7045365
hsa-miR-423-5p gaCCCCTCAacaatg UGAGGGGC m7a (m7a->m6a) HPSEF_4829_G5772.1_7045365

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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