SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0024201
Gene Symbol: ATM
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.108331888A>T COSM3716766 SS6003119 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-335-5p aatCTCTTGAatttc UCAAGAGC m7a Created HHFKP_29550_cluster-3823_22_129
hsa-miR-518d-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-518e-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-518f-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-519a-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-519b-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-519c-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-520c-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-520g-5p aatCTCTAGAatttc UCUAGAGG m7a Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-522-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-523-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-526a aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-335-5p aatCTCTTGAatttc UCAAGAGC m7a Created HHFKP_29550_cluster-3823_22_129
hsa-miR-518d-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-518e-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-518f-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-519a-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-519b-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-519c-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-520c-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-520g-5p aatCTCTAGAatttc UCUAGAGG m7a Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-522-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-523-5p aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-526a aatCTCTAGAatttc CUCUAGAG m7b Disrupted HHFKP_29550_cluster-3823_22_129

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108331880T>C COSM3733227 305 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4687-3p ttACAGCCAatctct UGGCUGUU m7a (m6a->m7a) HHFKP_29550_cluster-3823_22_129
hsa-miR-4718 tTACAGCTaatctct AGCUGUAC m7a Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-5186 ttacagcCAATCTCt AGAGAUUG m7b Created HHFKP_29550_cluster-3823_22_129
hsa-miR-647 ttaCAGCCAatctct GUGGCUGC m6b Created HHFKP_29550_cluster-3823_22_129
hsa-miR-1537-5p TTACAGCTaatctct AGCUGUAA m8a Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-4687-3p ttACAGCCAatctct UGGCUGUU m7a (m6a->m7a) HHFKP_29550_cluster-3823_22_129
hsa-miR-4718 tTACAGCTaatctct AGCUGUAC m7a Disrupted HHFKP_29550_cluster-3823_22_129
hsa-miR-5186 ttacagcCAATCTCt AGAGAUUG m7b Created HHFKP_29550_cluster-3823_22_129
hsa-miR-647 ttaCAGCCAatctct GUGGCUGC m6b Created HHFKP_29550_cluster-3823_22_129

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108331506A>C COSM1739728 M012 [haematopoietic_and_lymphoid_tissue][lymph_node][lymphoid_neoplasm][mantle_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1287-3p ctGCTAGAatgggga CUCUAGCC m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-3146 ctgCTAGCATGggga CAUGCUAG m8a Created HHFCT_30840_cluster-3823_12_108
hsa-miR-621 cTGCTAGCatgggga GGCUAGCA m7b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-1287-3p ctGCTAGAatgggga CUCUAGCC m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-3146 ctgCTAGCATGggga CAUGCUAG m8a Created HHFCT_30840_cluster-3823_12_108
hsa-miR-621 cTGCTAGCatgggga GGCUAGCA m7b Created HHFCT_30840_cluster-3823_12_108

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108331505G>A COSM3443169 TCGA-D3-A51T-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1287-3p gctGCTAGAatgggg CUCUAGCC m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-374b-3p gCTGCTAAaatgggg CUUAGCAG m7b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-1287-3p gctGCTAGAatgggg CUCUAGCC m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-374b-3p gCTGCTAAaatgggg CUUAGCAG m7b Created HHFCT_30840_cluster-3823_12_108

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108331504A>G COSM333214 LUAD-B01145 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1287-3p ggctGCTAGAatggg CUCUAGCC m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-338-3p ggcTGCTGGAatggg UCCAGCAU m7a Created HHFCT_30840_cluster-3823_12_108
hsa-miR-4530 ggCTGCTGGaatggg CCCAGCAG m7b (m6b->m7b) HHFCT_30840_cluster-3823_12_108

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108331503T>C COSM3724757 254891 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1287-3p tggctGCTAGAatgg CUCUAGCC m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-3128 tggcTGCCAGAatgg UCUGGCAA m7a Created HHFCT_30840_cluster-3823_12_108
hsa-miR-424-5p tgGCTGCTagaatgg CAGCAGCA m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-4524a-5p tgGCTGCTAgaatgg AUAGCAGC m7b (m7b->m6b) HHFCT_30840_cluster-3823_12_108
hsa-miR-4524b-5p tgGCTGCTAgaatgg AUAGCAGC m7b (m7b->m6b) HHFCT_30840_cluster-3823_12_108
hsa-miR-4720-5p tggcTGCCAGaatgg CCUGGCAU m6b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-4799-3p tggcTGCCAGaatgg ACUGGCAU m6b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-497-5p tgGCTGCTagaatgg CAGCAGCA m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-5588-5p tggcTGCCAGaatgg ACUGGCAU m6b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-646 tgGCTGCTagaatgg AAGCAGCU m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-6838-5p tgGCTGCTagaatgg AAGCAGCA m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-6868-5p tggCTGCCAGaatgg ACUGGCAG m7b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-7150 tggCTGCCAGaatgg CUGGCAGG m7a Created HHFCT_30840_cluster-3823_12_108
hsa-miR-1287-3p tggctGCTAGAatgg CUCUAGCC m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-3128 tggcTGCCAGAatgg UCUGGCAA m7a Created HHFCT_30840_cluster-3823_12_108
hsa-miR-424-5p tgGCTGCTagaatgg CAGCAGCA m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-4524a-5p tgGCTGCTAgaatgg AUAGCAGC m7b (m7b->m6b) HHFCT_30840_cluster-3823_12_108
hsa-miR-4524b-5p tgGCTGCTAgaatgg AUAGCAGC m7b (m7b->m6b) HHFCT_30840_cluster-3823_12_108
hsa-miR-4720-5p tggcTGCCAGaatgg CCUGGCAU m6b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-4799-3p tggcTGCCAGaatgg ACUGGCAU m6b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-497-5p tgGCTGCTagaatgg CAGCAGCA m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-5588-5p tggcTGCCAGaatgg ACUGGCAU m6b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-646 tgGCTGCTagaatgg AAGCAGCU m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-6838-5p tgGCTGCTagaatgg AAGCAGCA m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-6868-5p tggCTGCCAGaatgg ACUGGCAG m7b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-7150 tggCTGCCAGaatgg CUGGCAGG m7a Created HHFCT_30840_cluster-3823_12_108

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108331498G>A COSM758332 1791123 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-424-5p ccaattgGCTGCTag CAGCAGCA m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-4274 ccaattGACTGCTag CAGCAGUC m7b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-4519 ccaattgACTGCTag CAGCAGUG m6b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-4524a-5p ccaattgGCTGCTAg AUAGCAGC m7b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-4524b-5p ccaattgGCTGCTAg AUAGCAGC m7b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-497-5p ccaattgGCTGCTag CAGCAGCA m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-646 ccaattgGCTGCTag AAGCAGCU m6b Disrupted HHFCT_30840_cluster-3823_12_108
hsa-miR-6838-5p ccaattgGCTGCTag AAGCAGCA m6b Disrupted HHFCT_30840_cluster-3823_12_108

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108331494A>T COSM1289463 CLL073 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-224-3p tgtACCATTTggctg AAAAUGGU m7b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-522-3p tgtACCATTTggctg AAAAUGGU m7b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-5579-5p tGTACCATttggctg UAUGGUAC m7b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-224-3p tgtACCATTTggctg AAAAUGGU m7b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-522-3p tgtACCATTTggctg AAAAUGGU m7b Created HHFCT_30840_cluster-3823_12_108
hsa-miR-5579-5p tGTACCATttggctg UAUGGUAC m7b Created HHFCT_30840_cluster-3823_12_108

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108227636A>G COSM4017603 TCGA-BR-4361-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4503 gtctagTGCTTAAtg UUUAAGCA m7b Created HHFKP_29534_cluster-3823_6_8
hsa-miR-6792-5p gtctagTGCTTAatg GUAAGCAG m6b Created HHFKP_29534_cluster-3823_6_8
hsa-miR-4503 gtctagTGCTTAAtg UUUAAGCA m7b Created HHFKP_29534_cluster-3823_6_8
hsa-miR-6792-5p gtctagTGCTTAatg GUAAGCAG m6b Created HHFKP_29534_cluster-3823_6_8

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108227627G>T COSM4183805 CHC097T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-218-2-3p GAACCATGagtctag CAUGGUUC m8a Disrupted HHFKP_29534_cluster-3823_6_8

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108227626T>C COSM1561141 TCGA-AH-6643-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-218-2-3p tGAACCATGagtcta CAUGGUUC m8a (m8a->m7a) HHFKP_29534_cluster-3823_6_8
hsa-miR-4636 tgaacCACGAGTcta AACUCGUG m7b Created HHFKP_29534_cluster-3823_6_8
hsa-miR-218-2-3p tGAACCATGagtcta CAUGGUUC m8a (m8a->m7a) HHFKP_29534_cluster-3823_6_8
hsa-miR-4636 tgaacCACGAGTcta AACUCGUG m7b Created HHFKP_29534_cluster-3823_6_8

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108227625A>T COSM22508 7 [breast][NS][carcinoma_in_situ][ductal_and_lobular_carcinoma_in_situ]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-218-2-3p gtGAACCATGagtct CAUGGUUC m8a Disrupted HHFKP_29534_cluster-3823_6_8
hsa-miR-4761-5p gtgaACCTTGagtct ACAAGGUG m6b Created HHFKP_29534_cluster-3823_6_8

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108227625A>G COSM1561142 RK077_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-218-2-3p gtGAACCATGagtct CAUGGUUC m8a Disrupted HHFKP_29534_cluster-3823_6_8
hsa-miR-4798-3p gtgaacCGTGAGTct AACUCACG m7b Created HHFKP_29534_cluster-3823_6_8
hsa-miR-218-2-3p gtGAACCATGagtct CAUGGUUC m8a Disrupted HHFKP_29534_cluster-3823_6_8
hsa-miR-4798-3p gtgaacCGTGAGTct AACUCACG m7b Created HHFKP_29534_cluster-3823_6_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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