SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0058786
Gene Symbol: ARL4C
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.234496269G>A COSM1406483 TCGA-G4-6628-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3120-5p ccaAGACAGagctgc CCUGUCUG m6b Created HHRBL_8903_BCBL1-2of3-SCL_13236
hsa-miR-6736-3p ccaagacGGAGCTGc UCAGCUCC m7b Disrupted HHRBL_8903_BCBL1-2of3-SCL_13236
hsa-miR-6827-3p ccaAGACGGagctgc ACCGUCUC m6b Disrupted HHRBL_8903_BCBL1-2of3-SCL_13236
hsa-miR-6888-3p ccaAGACAGAgctgc AUCUGUCU m7b Created HHRBL_8903_BCBL1-2of3-SCL_13236

Mutation Mutation ID Sample Name Cancer Type
chr2:g.234496216T>C COSM1183605 587256 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3194-5p ctGCTGGCCatcgcc GGCCAGCC m7a (m6a->m7a) HHRBL_8903_BCBL1-2of3-SCL_13236
hsa-miR-4435 ctgCTGGCCATcgcc AUGGCCAG m8a Created HHRBL_8903_BCBL1-2of3-SCL_13236
hsa-miR-634 cTGCTGGTcatcgcc AACCAGCA m7b Disrupted HHRBL_8903_BCBL1-2of3-SCL_13236

Mutation Mutation ID Sample Name Cancer Type
chr2:g.234496042G>A COSM1018210 TCGA-AP-A0LQ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1539 ctgaaaCGCAGGAag UCCUGCGC m7a Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-1914-5p ctgaaaCACAGGaag CCCUGUGC m6b Created HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-3074-5p ctgaaacGCAGGAAg GUUCCUGC m7b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-3193 ctgaaACGCAGGAag UCCUGCGU m8a Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-4520-5p ctgaaACGCAGGaag CCUGCGUG m7a Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-6854-3p ctGAAACGCAggaag UGCGUUUC m8a Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-7152-5p ctgaaacACAGGAAg UUUCCUGU m7b Created HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-1539 ctgaaaCGCAGGAag UCCUGCGC m7a Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-1914-5p ctgaaaCACAGGaag CCCUGUGC m6b Created HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-3074-5p ctgaaacGCAGGAAg GUUCCUGC m7b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-3193 ctgaaACGCAGGAag UCCUGCGU m8a Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-4520-5p ctgaaACGCAGGaag CCUGCGUG m7a Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-6854-3p ctGAAACGCAggaag UGCGUUUC m8a Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-7152-5p ctgaaacACAGGAAg UUUCCUGU m7b Created HHRBL_8902_BCBL1-2of3-SCL_9957

Mutation Mutation ID Sample Name Cancer Type
chr2:g.234496024A>C COSM117473 TCGA-61-2012-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3182 ctcaagCAGAAGaag GCUUCUGU m6b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-4659a-3p ctcaagcAGAAGAAg UUUCUUCU m7b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-4659b-3p ctcaagcAGAAGAAg UUUCUUCU m7b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-6738-3p ctcaaGCAGAAGaag CUUCUGCC m7a Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-6828-3p ctcaAGCAGAagaag AUCUGCUC m6b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957

Mutation Mutation ID Sample Name Cancer Type
chr2:g.234496023G>C COSM4596175 NOKSI [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-218-5p tcAAGCACAAgaaga UUGUGCUU m8a Created HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-3182 tcaagCAGAAGaaga GCUUCUGU m6b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-4659a-3p tcaagcAGAAGAAga UUUCUUCU m7b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-4659b-3p tcaagcAGAAGAAga UUUCUUCU m7b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-4778-3p tcaagcaGAAGAAGa UCUUCUUC m7b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-578 tcaagcACAAGAAGa CUUCUUGU m8a Created HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-581 tcaagCACAAGAaga UCUUGUGU m7a Created HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-636 tCAAGCACAagaaga UGUGCUUG m8a (m7a->m8a) HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-6738-3p tcaaGCAGAAGaaga CUUCUGCC m7a Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-6828-3p tcaAGCAGAagaaga AUCUGCUC m6b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-218-5p tcAAGCACAAgaaga UUGUGCUU m8a Created HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-3182 tcaagCAGAAGaaga GCUUCUGU m6b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-4659a-3p tcaagcAGAAGAAga UUUCUUCU m7b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-4659b-3p tcaagcAGAAGAAga UUUCUUCU m7b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-4778-3p tcaagcaGAAGAAGa UCUUCUUC m7b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-578 tcaagcACAAGAAGa CUUCUUGU m8a Created HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-581 tcaagCACAAGAaga UCUUGUGU m7a Created HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-636 tCAAGCACAagaaga UGUGCUUG m8a (m7a->m8a) HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-6738-3p tcaaGCAGAAGaaga CUUCUGCC m7a Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957
hsa-miR-6828-3p tcaAGCAGAagaaga AUCUGCUC m6b Disrupted HHRBL_8902_BCBL1-2of3-SCL_9957

Mutation Mutation ID Sample Name Cancer Type
chr2:g.234495799G>A COSN506993
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1295a atttacCGGCCTAct UUAGGCCG m7b Disrupted HHRBL_8901_BCBL1-2of3-SCL_7894
hsa-miR-133a-5p attTACCAGCctact AGCUGGUA m7b Created HHRBL_8901_BCBL1-2of3-SCL_7894
hsa-miR-3929 atttacCAGCCTact GAGGCUGA m6b Created HHRBL_8901_BCBL1-2of3-SCL_7894
hsa-miR-4419b atttacCAGCCTact GAGGCUGA m6b Created HHRBL_8901_BCBL1-2of3-SCL_7894
hsa-miR-4430 atttaCCAGCCTact AGGCUGGA m7a Created HHRBL_8901_BCBL1-2of3-SCL_7894
hsa-miR-4478 atttacCAGCCTact GAGGCUGA m6b Created HHRBL_8901_BCBL1-2of3-SCL_7894
hsa-miR-4490 atTTACCAGcctact UCUGGUAA m7b (m6b->m7b) HHRBL_8901_BCBL1-2of3-SCL_7894
hsa-miR-4505 atttaCCAGCCTact AGGCUGGG m7a Created HHRBL_8901_BCBL1-2of3-SCL_7894

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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