SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001256169
Gene Symbol: APOM
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.31656507C>T COSM1077626 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-95-5p acTTTATTGcagggg UCAAUAAA m7b (m6b->m7b) HHFCT_137577_cluster-19153_2_8
hsa-miR-5590-3p ACTTTATTgcagggg AAUAAAGU m8a Created HHFCT_137577_cluster-19153_2_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.31652472C>G COSN14911583 LP6007504-DNA_A01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5695 atcgCTTGGAGatcc ACUCCAAG m7b Created HHFKP_122260_cluster-19772_12_7
hsa-miR-519e-5p atcgcTTGGAGAtcc UUCUCCAA m7b Created HHFKP_122260_cluster-19772_12_7
hsa-miR-519d-5p atcgcTTGGAGatcc CCUCCAAA m6b Created HHFKP_122260_cluster-19772_12_7
hsa-miR-515-5p atcgcTTGGAGAtcc UUCUCCAA m7b Created HHFKP_122260_cluster-19772_12_7

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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