SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001655
Gene Symbol: ALKBH2

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109092537G>T COSM1946053 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr12:g.109092520A>T COSM467746 TCGA-B0-5116-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6074 aagaagtTGAATATt GAUAUUCA m7b Created HHHNE_688_ALKBH2|NM_001205179|exon_CDS|-4.20807444215675|1.96411694263874
hsa-miR-4272 aagaaGTTGAATatt CAUUCAAC m7b Created HHHNE_688_ALKBH2|NM_001205179|exon_CDS|-4.20807444215675|1.96411694263874
hsa-miR-3682-5p aAGAAGTAGaatatt CUACUUCU m8a (m8a->m7a) HHHNE_688_ALKBH2|NM_001205179|exon_CDS|-4.20807444215675|1.96411694263874
hsa-miR-138-1-3p aaGAAGTAGaatatt GCUACUUC m7b (m7b->m6b) HHHNE_688_ALKBH2|NM_001205179|exon_CDS|-4.20807444215675|1.96411694263874

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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