SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | hsa_circ_0025915 |
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Gene Symbol: | ADAMTS20 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.43454043C>T | COSM1361600 | TCGA-DM-A1DB-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-337-5p | ttGCCGTTatgggct | GAACGGCU | m6b | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-4641 | ttgccgtCATGGGCt | UGCCCAUG | m7b | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-548al | TTGCCGTTatgggct | AACGGCAA | m8a | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-337-5p | ttGCCGTTatgggct | GAACGGCU | m6b | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-4641 | ttgccgtCATGGGCt | UGCCCAUG | m7b | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-548al | TTGCCGTTatgggct | AACGGCAA | m8a | Created | HPCB1_10129_G12683.1_43847838 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.43454042A>C | COSM4947168 | TCGA-13-0890-01 | [ovary][NS][carcinoma][serous_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4641 | tgccgtCATGGGCta | UGCCCAUG | m7b | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-6840-3p | tgccgTCCTGGGCta | GCCCAGGA | m8a | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-4641 | tgccgtCATGGGCta | UGCCCAUG | m7b | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-6840-3p | tgccgTCCTGGGCta | GCCCAGGA | m8a | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-4641 | tgccgtCATGGGCta | UGCCCAUG | m7b | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-6840-3p | tgccgTCCTGGGCta | GCCCAGGA | m8a | Created | HPCB1_10129_G12683.1_43847838 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.43454039G>A | COSM3460795 | TCGA-EE-A29M-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-103b | cgtcatgGGCTATGt | UCAUAGCC | m7b | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-3651 | cgtcatGGGCTATGt | CAUAGCCC | m8a | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-4641 | cgtCATGGGCtatgt | UGCCCAUG | m7b | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-6847-3p | cgtCATGAGCtatgt | GGCUCAUG | m7b | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-6854-5p | cgtcaTGAGCTatgt | AAGCUCAG | m6b | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-7705 | cgtcatGAGCTATgt | AAUAGCUC | m7b | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-103b | cgtcatgGGCTATGt | UCAUAGCC | m7b | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-3651 | cgtcatGGGCTATGt | CAUAGCCC | m8a | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-4641 | cgtCATGGGCtatgt | UGCCCAUG | m7b | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-6847-3p | cgtCATGAGCtatgt | GGCUCAUG | m7b | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-6854-5p | cgtcaTGAGCTatgt | AAGCUCAG | m6b | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-7705 | cgtcatGAGCTATgt | AAUAGCUC | m7b | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-103b | cgtcatgGGCTATGt | UCAUAGCC | m7b | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-3651 | cgtcatGGGCTATGt | CAUAGCCC | m8a | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-4641 | cgtCATGGGCtatgt | UGCCCAUG | m7b | Disrupted | HPCB1_10129_G12683.1_43847838 |
hsa-miR-6847-3p | cgtCATGAGCtatgt | GGCUCAUG | m7b | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-6854-5p | cgtcaTGAGCTatgt | AAGCUCAG | m6b | Created | HPCB1_10129_G12683.1_43847838 |
hsa-miR-7705 | cgtcatGAGCTATgt | AAUAGCUC | m7b | Created | HPCB1_10129_G12683.1_43847838 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.43434291C>A | COSM1511858 | TCGA-86-6851-01 | [lung][right_upper_lobe][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3688-5p | cTTGCCACTtccatc | AGUGGCAA | m8a | (m8a->m7a) | HPCB3_5560_G7608.1_43828094 |
hsa-miR-4795-5p | cttgCCACTTCcatc | AGAAGUGG | m7b | Disrupted | HPCB3_5560_G7608.1_43828094 |
hsa-miR-182-5p | cTTGCCAAttccatc | UUUGGCAA | m7b | Created | HPCB3_5560_G7608.1_43828094 |
hsa-miR-3688-5p | cTTGCCACTtccatc | AGUGGCAA | m8a | (m8a->m7a) | HPCB3_5560_G7608.1_43828094 |
hsa-miR-4795-5p | cttgCCACTTCcatc | AGAAGUGG | m7b | Disrupted | HPCB3_5560_G7608.1_43828094 |