SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0019063
Gene Symbol: ACTA2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.88939662T>A COSM4572128 CSCC-11-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1208 gagaAACAGTGttat UCACUGUU m7b Created HHFCT_18469_cluster-3068_7_9
hsa-miR-141-3p gagaaaCAGTGTTAt UAACACUG m8a Created HHFCT_18469_cluster-3068_7_9
hsa-miR-200a-3p gagaaaCAGTGTTAt UAACACUG m8a Created HHFCT_18469_cluster-3068_7_9
hsa-miR-452-5p gagAAACAGTgttat AACUGUUU m7b Created HHFCT_18469_cluster-3068_7_9
hsa-miR-4676-3p gagAAACAGTGttat CACUGUUU m8a Created HHFCT_18469_cluster-3068_7_9
hsa-miR-6757-3p gagaaaCAGTGTTat AACACUGG m7a Created HHFCT_18469_cluster-3068_7_9
hsa-miR-892c-3p gagAAACAGTGttat CACUGUUU m8a Created HHFCT_18469_cluster-3068_7_9

Mutation Mutation ID Sample Name Cancer Type
chr10:g.88939658T>C COSM4388980 8069456 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376c-3p aactgtgCTATGTag AACAUAGA m6b Created HHFCT_18469_cluster-3068_7_9
hsa-miR-585-5p aacTGTGCTAtgtag CUAGCACA m7b Created HHFCT_18469_cluster-3068_7_9
Mutation Mutation ID Sample Name Cancer Type
chr10:g.88938111C>T COSM3415322 TCGA-EI-6882-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr10:g.88938110G>A COSM3868021 TCGA-EE-A3J7-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5002-5p gccgACCAAATgcag AAUUUGGU m7b Created HHFCT_18467_cluster-3068_4_15

Mutation Mutation ID Sample Name Cancer Type
chr10:g.88938101A>C COSM4016480 TCGA-BR-4362-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1237-3p atgCAGAAGGAgatc UCCUUCUG m8a Disrupted HHFCT_18467_cluster-3068_4_15
hsa-miR-1248 atgcAGAAGGagatc ACCUUCUU m6b Disrupted HHFCT_18467_cluster-3068_4_15
hsa-miR-3605-3p atgcagACGGAGatc CCUCCGUG m6b Created HHFCT_18467_cluster-3068_4_15
hsa-miR-544a aTGCAGAAggagatc AUUCUGCA m7b Disrupted HHFCT_18467_cluster-3068_4_15
hsa-miR-6827-3p atgcAGACGGagatc ACCGUCUC m6b Created HHFCT_18467_cluster-3068_4_15
hsa-miR-6868-3p atgcAGAAGGAgatc UUCCUUCU m7b Disrupted HHFCT_18467_cluster-3068_4_15

Mutation Mutation ID Sample Name Cancer Type
chr10:g.88938099G>T COSM4981151 3N36-VS-3T36 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1237-3p gCAGAAGGAgatcac UCCUUCUG m8a (m8a->m7a) HHFCT_18467_cluster-3068_4_15
hsa-miR-138-1-3p gcaGAAGTAGatcac GCUACUUC m7b Created HHFCT_18467_cluster-3068_4_15
hsa-miR-3682-5p gcAGAAGTAGatcac CUACUUCU m8a Created HHFCT_18467_cluster-3068_4_15
hsa-miR-6868-3p gcAGAAGGAgatcac UUCCUUCU m7b (m7b->m6b) HHFCT_18467_cluster-3068_4_15
hsa-miR-7641 gcagaagGAGATCAc UUGAUCUC m7b Disrupted HHFCT_18467_cluster-3068_4_15

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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