SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000019
Gene Symbol: ACAT1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.108147326A>G COSM1350704 TCGA-G4-6588-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-630 ggAGAATACggtctt AGUAUUCU m7b (m7b->m6b) HHFCT_30828_cluster-3822_3_1967

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108146280G>A COSM4017593 TCGA-HU-A4GN-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8086 tgtACTAGCAaacat UGCUAGUC m7a Disrupted HHFCT_30827_cluster-3822_2_23
hsa-miR-8068 tgtactAACAAACAt UGUUUGUU m8a Created HHFCT_30827_cluster-3822_2_23
hsa-miR-449c-3p tgtACTAGCAAacat UUGCUAGU m8a Disrupted HHFCT_30827_cluster-3822_2_23

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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