SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0080962
Gene Symbol: ABCB1
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.87561345A>G COSM747728 TCGA-34-5929-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-153-3p gTATGCAAaagctgg UUGCAUAG m7a Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-208a-5p gtatgcAAAAGCTgg GAGCUUUU m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-208b-5p gtatgcAAAAGCTgg AAGCUUUU m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-20a-3p gtATGCAGaagctgg ACUGCAUU m6b Created HHFCT_143285_cluster-21497_2_12
hsa-miR-3140-3p gtatgCAAAAGCTgg AGCUUUUG m8a Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-3680-3p gtATGCAAAAgctgg UUUUGCAU m8a Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-448 gTATGCAAaagctgg UUGCAUAU m7a Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-544a gtaTGCAGAAgctgg AUUCUGCA m7b Created HHFCT_143285_cluster-21497_2_12
hsa-miR-557 gtaTGCAAAagctgg GUUUGCAC m6b Disrupted HHFCT_143285_cluster-21497_2_12

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87561342G>A COSM39787 Br27P [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p tGCAAAAActggagc CUUUUUGC m7b Created HHFCT_143285_cluster-21497_2_12
hsa-miR-145-5p tgcaaaAACTGGAgc GUCCAGUU m7b Created HHFCT_143285_cluster-21497_2_12
hsa-miR-208a-5p tgcAAAAGCTggagc GAGCUUUU m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-208b-5p tgcAAAAGCTggagc AAGCUUUU m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-3140-3p tgCAAAAGCTggagc AGCUUUUG m8a Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-3925-3p tgcaaaaACTGGAGc ACUCCAGU m7b Created HHFCT_143285_cluster-21497_2_12
hsa-miR-4328 tgcaAAAACTGGagc CCAGUUUU m8a Created HHFCT_143285_cluster-21497_2_12
hsa-miR-5195-3p tgcaaaAACTGGAgc AUCCAGUU m7b Created HHFCT_143285_cluster-21497_2_12
hsa-miR-766-3p tgcaaaaGCTGGAGc ACUCCAGC m7b Disrupted HHFCT_143285_cluster-21497_2_12

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87561341C>A COSM1550435 TCGA-55-7910-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-208a-5p gcAAAAGCTggagca GAGCUUUU m7b (m7b->m6b) HHFCT_143285_cluster-21497_2_12
hsa-miR-208b-5p gcAAAAGCTggagca AAGCUUUU m7b (m7b->m6b) HHFCT_143285_cluster-21497_2_12
hsa-miR-3140-3p gCAAAAGCTggagca AGCUUUUG m8a (m8a->m7a) HHFCT_143285_cluster-21497_2_12
hsa-miR-766-3p gcaaaaGCTGGAGca ACUCCAGC m7b Disrupted HHFCT_143285_cluster-21497_2_12

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87561340T>C COSM1452591 TCGA-DM-A28G-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-208a-5p cAAAAGCTggagcag GAGCUUUU m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-208b-5p cAAAAGCTggagcag AAGCUUUU m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-766-3p caaaaGCTGGAGcag ACUCCAGC m7b Disrupted HHFCT_143285_cluster-21497_2_12

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87561335C>A COSM602529 TCGA-50-5066-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-138-1-3p gctggaGAAGTAGCt GCUACUUC m8a Created HHFCT_143285_cluster-21497_2_12
hsa-miR-3682-5p gctggAGAAGTAGct CUACUUCU m8a Created HHFCT_143285_cluster-21497_2_12

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87561332T>C COSM3032711 HT115 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-3p ggagcagCAGCTGAa UCAGCUGG m7a Created HHFCT_143285_cluster-21497_2_12
hsa-miR-5690 ggagcaGTAGCTGAa UCAGCUAC m8a Disrupted HHFCT_143285_cluster-21497_2_12

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87561327G>C COSM747729 TCGA-60-2698-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-526b-5p agtagCTCAAGAGgt CUCUUGAG m8a Created HHFCT_143285_cluster-21497_2_12
hsa-miR-5690 aGTAGCTGAagaggt UCAGCUAC m8a (m8a->m7a) HHFCT_143285_cluster-21497_2_12
hsa-miR-610 agTAGCTCAagaggt UGAGCUAA m7a (m6a->m7a) HHFCT_143285_cluster-21497_2_12
hsa-miR-6515-3p agtagcTGAAGAGgt UCUCUUCA m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-877-3p agtagctGAAGAGGt UCCUCUUC m7b Disrupted HHFCT_143285_cluster-21497_2_12

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87561324G>T COSM1181284 587222 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6515-3p agcTGAAGAGgtctt UCUCUUCA m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-6821-3p agctgaAGAGGTCtt UGACCUCU m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-877-3p agctGAAGAGGtctt UCCUCUUC m7b Disrupted HHFCT_143285_cluster-21497_2_12

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87561319C>A COSM602530 TCGA-05-4427-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-192-3p aagaggtATTGGCAg CUGCCAAU m7b Created HHFCT_143285_cluster-21497_2_12
hsa-miR-323b-3p aagagGTATTGGcag CCCAAUAC m7b Created HHFCT_143285_cluster-21497_2_12
hsa-miR-4480 aagaggtCTTGGCag AGCCAAGU m6b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-6821-3p aAGAGGTCttggcag UGACCUCU m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-875-5p aaGAGGTATtggcag UAUACCUC m7b (m6b->m7b) HHFCT_143285_cluster-21497_2_12

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87561307T>A COSM4984033 3N57-VS-3T57 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-137 cAGCAATAAgaactg UUAUUGCU m8a (m7a->m8a) HHFCT_143285_cluster-21497_2_12
hsa-miR-2116-5p cagcaaTAAGAACtg GGUUCUUA m7b Created HHFCT_143285_cluster-21497_2_12
hsa-miR-302f cAGCAATTAgaactg UAAUUGCU m8a (m8a->m7a) HHFCT_143285_cluster-21497_2_12
hsa-miR-3168 cagcaatTAGAACTg GAGUUCUA m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-4735-5p cagcAATTAGaactg CCUAAUUU m6b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-5584-3p cagcaatAAGAACTg UAGUUCUU m7b Created HHFCT_143285_cluster-21497_2_12
hsa-miR-576-5p cagcaATTAGAActg AUUCUAAU m7b Disrupted HHFCT_143285_cluster-21497_2_12

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87561305G>T COSM1181290 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3168 gcaatTAGAACTgtg GAGUUCUA m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-374b-5p gcaATTATAactgtg AUAUAAUA m6b Created HHFCT_143285_cluster-21497_2_12
hsa-miR-4277 gcaattAGAACTGtg GCAGUUCU m7b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-4735-5p gcAATTAGaactgtg CCUAAUUU m6b Disrupted HHFCT_143285_cluster-21497_2_12
hsa-miR-576-5p gcaATTAGAActgtg AUUCUAAU m7b Disrupted HHFCT_143285_cluster-21497_2_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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