SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001089
Gene Symbol: ABCA3
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.2332465C>A COSN9644458 C0007T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4774-5p ctatTACCAGAagta UCUGGUAU m7a Disrupted HHRBL_5421_BCBL1-2of3-SCL_9866
hsa-miR-643 ctatTACAAGaagta ACUUGUAU m6b Created HHRBL_5421_BCBL1-2of3-SCL_9866
hsa-miR-578 ctattACAAGAAGta CUUCUUGU m8a Created HHRBL_5421_BCBL1-2of3-SCL_9866
hsa-miR-4490 ctaTTACCAGAagta UCUGGUAA m8a Disrupted HHRBL_5421_BCBL1-2of3-SCL_9866
hsa-miR-2054 cTATTACAagaagta CUGUAAUA m7b Created HHRBL_5421_BCBL1-2of3-SCL_9866

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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