SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_016378
Gene Symbol: VCX2
Description: Homo sapiens variable charge, X-linked 2 (VCX2), mRNA.
Gene Location: chrX(-):8137984-8139308
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.8169965A>G ICGC_1453567 TCGA-B5-A0JY-01A-11D-A10B-09 UterineCorpusEndometrioidCarcinoma(TCGA,US)
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4482-3p aagatAATAGAAtgaatgt
 0 UUUCUAUU m7b Created no TS -0.125 -9.37
hsa-miR-5696 aagataataAAATGAatgt
 0 CUCAUUUA m6b Disrupted -0.029 no TS 0.51

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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