SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_019075
Gene Symbol:	UGT1A10
Description:	Homo sapiens UDP glucuronosyltransferase 1 family, polypeptide A10 (UGT1A10), mRNA.
Gene Location:	chr2(+):234545122-234681951
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Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.233772577A>T			COSN6174748		RK119_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-4724-3p	tgggaaatAAGGTAaaatt	2	GUACCUUC	m6b	Disrupted	-0.145000	no TS	0.010000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.233772932A>G			COSN5500177		RK040_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.233772990A>G			COSN5500178		RK057_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1224-5p	tcaGTCCTCAtctctgtcg	1	GUGAGGAC	m7b	(m7b->m6b)	-0.179000	no TS	0.790000
hsa-miR-143-3p	tcagtccTCATCTCtgtcg	0	UGAGAUGA	m7b	Disrupted	-0.102000	no TS	0.280000
hsa-miR-3131	tcaGTCCTCGtctctgtcg	0	UCGAGGAC	m7b	(m6b->m7b)	no TS	-0.263000	-1.010000
hsa-miR-4756-3p	tcagtcctcATCTCTGtcg	0	CCAGAGAU	m7b	(m7b->m6c)	-0.063000	no TS	0.270000
hsa-miR-4770	tcagtccTCATCTCtgtcg	0	UGAGAUGA	m7b	Disrupted	-0.084000	no TS	0.270000
hsa-miR-611	tcaGTCCTCGtctctgtcg	0	GCGAGGAC	m7b	(m6b->m7b)	no TS	-0.263000	-9.480000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.233773055G>T			COSN9996535		C0080T		[kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.233773118G>A			COSN9230418		8065669		[pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1238	cttgctttGAGGAAaaaga	0	CUUCCUCG	m6b	Created	no TS	-0.117000	-1.760000
hsa-miR-186-3p	cttgCTTTGGGgaaaaaga	5	GCCCAAAG	m7b	Disrupted	-0.193000	-0.030000	3.170000
hsa-miR-2355-5p	cttgcttTGGGGAaaaaga	1	AUCCCCAG	m6b	Disrupted	-0.176000	no TS	7.130000
hsa-miR-3679-3p	cttgctttGGGGAAaaaga	1	CUUCCCCC	m6b	Disrupted	-0.179000	no TS	6.350000
hsa-miR-4446-5p	cttgctttgGGGAAAaaga	2	AUUUCCCU	m6b	Disrupted	-0.097000	no TS	1.370000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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