SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001204185 |
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Gene Symbol: | TP73 |
Description: | Homo sapiens tumor protein p73 (TP73), transcript variant 2, mRNA. |
Gene Location: | chr1(+):3569128-3652765 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr1:g.3733327G>T | ICGC_ssm_v3_743 | BN02T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3943 |
ttgtggggcGGGGGCTggc |
0 | UAGCCCCC | m7b | (m7b->m6c) | -0.357 | -0.266 | No effect |
hsa-miR-4323 |
ttgtggggcTGGGGCTGgc |
0 | CAGCCCCA | m8a | (m7b->m8a) | no TS | -0.114 |
-0.12 |