SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
RefSeq ID: | NM_003722 |
---|---|
Gene Symbol: | TP63 |
Description: | Homo sapiens tumor protein p63 (TP63), transcript variant 2, mRNA. |
Gene Location: | chr3(+):189349215-189615068 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.189894871G>A | COSN5147635 | PD4107a | [breast][NS][carcinoma][ductal_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.189896146C>T | COSN6573408 | ICGC_MB110 | [central_nervous_system][brain][primitive_neuroectodermal_tumour-medulloblastoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4780 |
cattctggTCAAGGGctgt |
2 |
ACCCUUGA | m7b | Disrupted | -0.025000 | no TS |
0.780000 |
hsa-miR-938 |
cattctggtTAAGGGCtgt |
0 | UGCCCUUA | m7b | (m6c->m7b) | no TS | -0.108000 |
-3.260000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.189896203C>T | COSN1937742 | RK052_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-193a-3p |
aagGGCCAGTgtggctcta |
0 | AACUGGCC | m7b | (m6b->m7b) | no TS | -0.083000 |
-0.010000 |
hsa-miR-193b-3p |
aagGGCCAGTgtggctcta |
0 | AACUGGCC | m7b | (m6b->m7b) | no TS | -0.102000 | No effect |
hsa-miR-449b-3p |
aagggccagTGTGGCTcta |
0 | CAGCCACA | m7b | (m6c->m7b) | no TS | -0.097000 |
-2.410000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.189896847C>T | COSN1937743 | RK141_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-140-5p |
tagaAACCACTagaaagtg |
2 |
CAGUGGUU | m7b | Disrupted | -0.355000 | -0.060000 |
0.060000 |
hsa-miR-4263 |
tagaaaccaTTAGAAagtg |
0 | AUUCUAAG | m6b | Created | no TS | 0.050000 |
-0.640000 |
hsa-miR-4460 |
tagaaACCACTAgaaagtg |
2 |
AUAGUGGU | m7b | Disrupted | -0.205000 | no TS |
0.340000 |
hsa-miR-576-5p |
tagaaaccATTAGAAagtg |
0 | AUUCUAAU | m7b | Created | no TS | 0.022000 |
-0.240000 |
hsa-miR-140-5p |
tagaAACCACTagaaagtg |
2 |
CAGUGGUU | m7b | Disrupted | -0.355 | -0.06 |
0.06 |
hsa-miR-4263 |
tagaaaccaTTAGAAagtg |
0 | AUUCUAAG | m6b | Created | no TS | 0.05 |
-0.64 |
hsa-miR-4460 |
tagaaACCACTAgaaagtg |
2 |
AUAGUGGU | m7b | Disrupted | -0.205 | no TS |
0.34 |
hsa-miR-576-5p |
tagaaaccATTAGAAagtg |
0 | AUUCUAAU | m7b | Created | no TS | 0.022 |
-0.24 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.189897094A>G | COSN5531014 | RK125_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1323 |
aaaAGTTTTGtatgcttta |
3 |
UCAAAACU | m7b | (m6b->m7b) | -0.058000 | -0.262000 |
-0.080000 |
hsa-miR-548o-3p |
aaaAGTTTTGtatgcttta |
3 |
CCAAAACU | m7b | (m6b->m7b) | -0.040000 | -0.226000 |
-3.020000 |
hsa-miR-5582-3p |
aaAAGTTTTAtatgcttta |
8 |
UAAAACUU | m8a | (m8a->m7a) | -0.006000 | 0.071000 | No effect |
hsa-miR-5689 |
aaaagtttTGTATGCTtta |
0 | AGCAUACA | m8a | Created | no TS | -0.298000 |
-0.020000 |