| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
| Home | Search | Help | Download | |||||
| RefSeq ID: | NM_001114982 |
|---|---|
| Gene Symbol: | TP63 |
| Description: | Homo sapiens tumor protein p63 (TP63), transcript variant 2, mRNA. |
| Gene Location: | chr3(+):189507448-189599284 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.189880247A>G | ICGC_7453E9F4-2A78-11E2-96E7-04FD496BB9B8 | CPCG_0102_Pr_P_P1 | ProstateCancer(OICR,CA) | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3941 |
tgtGTGTGTAtgtgtgtgc |
0 | UUACACAC | m7b | (m7b->m6b) | -0.249 | -0.078 |
0.28 |
| hsa-miR-4789-3p |
tgtgtgtgTATGTGTGtgc |
0 | CACACAUA | m8a | Disrupted | -0.113 | -0.072 |
-0.55 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.189880257G>A | COSN14936836 | LP6007544-DNA_A01 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-329 |
tgtgtgtgcGTGTGTatct |
0 | AACACACC | m6b | Disrupted | -0.211000 | -0.109000 |
-0.070000 |
| hsa-miR-362-3p |
tgtgtgtgcGTGTGTatct |
0 | AACACACC | m6b | Disrupted | -0.211000 | -0.109000 |
-0.070000 |
| hsa-miR-3941 |
tgtgtgtgcGTGTGTAtct |
0 | UUACACAC | m7b | (m7b->m6c) | -0.249000 | -0.162000 |
-0.090000 |
| hsa-miR-4643 |
tgtgtgtgCATGTGTatct |
1 |
GACACAUG | m7b | Created | -0.412000 | -0.660000 |
0.190000 |
| hsa-miR-466 |
tgtgtgtgcATGTGTATct |
1 |
AUACACAU | m8a | (m7b->m8a) | -0.184000 | -0.269000 |
0.270000 |
| hsa-miR-4717-3p |
tgtgtgtgCATGTGTatct |
5 |
ACACAUGG | m7a | Created | -0.247000 | -0.247000 |
0.010000 |
| hsa-miR-4789-3p |
tgtgtgtgcATGTGTatct |
1 |
CACACAUA | m6b | Created | -0.113000 | -0.179000 |
-0.300000 |
| hsa-miR-603 |
tgtgtgtgcGTGTGTatct |
6 |
CACACACU | m6b | Disrupted | -0.606000 | -0.508000 |
-0.030000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.189881130A>G | COSN1937736 | RK048_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-5579-5p |
ctaccTACCATAaaaccag |
6 |
UAUGGUAC | m7a | Disrupted | -0.087000 | no TS |
6.620000 |
| hsa-miR-584-5p |
ctacctACCATAAaaccag |
6 |
UUAUGGUU | m7a | Disrupted | -0.071000 | no TS |
3.460000 |
| hsa-miR-5579-5p |
ctaccTACCATAaaaccag |
6 |
UAUGGUAC | m7a | Disrupted | -0.087000 | no TS |
6.620000 |
| hsa-miR-584-5p |
ctacctACCATAAaaccag |
6 |
UUAUGGUU | m7a | Disrupted | -0.071000 | no TS |
3.460000 |
| hsa-miR-5579-5p |
ctaccTACCATAaaaccag |
6 |
UAUGGUAC | m7a | Disrupted | -0.087 | no TS |
6.62 |
| hsa-miR-584-5p |
ctacctACCATAAaaccag |
6 |
UUAUGGUU | m7a | Disrupted | -0.071 | no TS |
3.46 |