SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_005486
Gene Symbol: TOM1L1
Description: Homo sapiens target of myb1 (chicken)-like 1 (TOM1L1), mRNA.
Gene Location: chr17(+):52978051-53039328
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.54961532A>T ICGC_ssm_v3_148127 HCC82T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4753-5p atgtttcacTGGCCTTcct
 0 CAAGGCCA m7b (m6c->m7b) no TS -0.171 -2.76

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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