| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_000594 |
|---|---|
| Gene Symbol: | TNF |
| Description: | Homo sapiens tumor necrosis factor (TNF), mRNA. |
| Gene Location: | chr6(+):31543349-31546112 |
| Browse Associations | |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr6:g.31577645G>T | COSN4858769 | tumor_4177376 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3667-5p |
gaattgGGGTCTTagggtc |
0 | AAAGACCC | m7b | Created | no TS | -0.351000 |
-3.900000 |
| hsa-miR-3943 |
gaattGGGGGCTtagggtc |
1 |
UAGCCCCC | m7b | Disrupted | -0.370000 | no TS |
0.130000 |
| hsa-miR-548ao-3p |
gaattggGGTCTTagggtc |
0 | AAAGACCG | m6b | Created | no TS | -0.156000 |
2.190000 |