SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_003234
Gene Symbol: TFRC
Description: Homo sapiens transferrin receptor (p90, CD71) (TFRC), transcript variant 2, mRNA.
Gene Location: chr3(-):195776154-195808961
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.196049568A>G COSN8365486 tumor_4163639 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-2114-3p aacAGGCTCGatattcctg
 2
 CGAGCCUC m7a (m6b->m7a) -0.192000 no TS 0.110000
hsa-miR-4461 aacaggCTCAATattcctg
 2
 GAUUGAGA m6b Disrupted -0.069000 no TS 0.210000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.196050368A>G COSN1940073 RK010_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-2276 tttagTTGCAGAaacattt
 12
 UCUGCAAG m7a Disrupted -0.085000 -0.048000 0.060000
hsa-miR-4772-3p tttaGTTGCAGaaacattt
 11
 CCUGCAAC m7b Disrupted -0.444000 -0.263000 0.050000
hsa-miR-544a tttagtTGCAGAAacattt
 10
 AUUCUGCA m7b Disrupted -0.101000 no TS 1.930000
hsa-miR-718 tttagttGCGGAAacattt
 0 CUUCCGCC m6b Created no TS -0.143000 -1.560000
hsa-miR-2276 tttagTTGCAGAaacattt
 12
 UCUGCAAG m7a Disrupted -0.085000 -0.048000 0.060000
hsa-miR-4772-3p tttaGTTGCAGaaacattt
 11
 CCUGCAAC m7b Disrupted -0.444000 -0.263000 0.050000
hsa-miR-544a tttagtTGCAGAAacattt
 10
 AUUCUGCA m7b Disrupted -0.101000 no TS 1.930000
hsa-miR-718 tttagttGCGGAAacattt
 0 CUUCCGCC m6b Created no TS -0.143000 -1.560000
hsa-miR-2276 tttagTTGCAGAaacattt
 0 UCUGCAAG m7a Disrupted -0.085 -0.048 0.06
hsa-miR-4772-3p tttaGTTGCAGaaacattt
 0 CCUGCAAC m7b Disrupted -0.444 -0.263 0.05
hsa-miR-544a tttagtTGCAGAAacattt
 0 AUUCUGCA m7b Disrupted -0.101 no TS 1.93
hsa-miR-718 tttagttGCGGAAacattt
 0 CUUCCGCC m6b Created no TS -0.143 -1.56

Mutation Mutation ID Sample Name Cancer Type
chr3:g.196051343T>A COSN6760872 RK187_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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