SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_144674
Gene Symbol: TEKT5
Description: Homo sapiens tektin 5 (TEKT5), mRNA.
Gene Location: chr16(-):10721360-10788802
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.10627538A>T COSN8590699 4095_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3157-5p aattggaaaTGGCTGAgaa
 0 UUCAGCCA m7b (m6b->m7b) no TS -0.252000 -1.940000
hsa-miR-4691-3p aattggaaaTGGCTGagaa
 0 CCAGCCAC m6b Created no TS -0.170000 -15.160000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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