SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001199135 |
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Gene Symbol: | TANK |
Description: | Homo sapiens TRAF family member-associated NFKB activator (TANK), transcript variant 3, mRNA. |
Gene Location: | chr2(+):162016938-162092683 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr2:g.161236069T>A | COSN1227543 | HX17T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr2:g.161236074G>C | COSN1227544 | HX17T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-5571-5p |
caactggtAGAATTattta |
6 |
CAAUUCUC | m6b | Disrupted | -0.039000 | no TS |
0.010000 |
hsa-miR-5571-5p |
caactggtAGAATTattta |
0 | CAAUUCUC | m6b | Disrupted | -0.039 | no TS |
0.01 |