SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_173499 |
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Gene Symbol: | SPATA8 |
Description: | Homo sapiens spermatogenesis associated 8 (SPATA8), mRNA. |
Gene Location: | chr15(+):97326678-97328845 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr15:g.96785138C>G | COSN8590676 | 4000_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3127-5p |
tgtccctaCCCTGAagctc |
2 |
AUCAGGGC | m6b | Disrupted | -0.169000 | no TS |
7.700000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr15:g.96785185G>A | cosmic_v64_1838387 | Melanoma | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1343 |
cagCCCAGGAaactggtct |
0 | CUCCUGGG | m7b | (m6b->m7b) | no TS | -0.394 | No effect |
hsa-miR-3074-5p |
cagccCAGGAAactggtct |
0 | GUUCCUGC | m6b | Created | no TS | -0.075 | No effect |
hsa-miR-4292 |
cagCCCAGGGaactggtct |
1 |
CCCCUGGG | m7b | (m7b->m6b) | -0.448 | no TS |
2.12 |
hsa-miR-4308 |
cagcCCAGGGAactggtct |
1 |
UCCCUGGA | m7a | Disrupted | -0.178 | no TS |
0.01 |
hsa-miR-584-3p |
cagcccagGGAACTGgtct |
0 | UCAGUUCC | m7b | Disrupted | -0.13 | no TS |
-1.29 |
hsa-miR-642b-5p |
cagcccAGGGAACtggtct |
1 |
GGUUCCCU | m7b | Disrupted | -0.139 | no TS |
-1.38 |
hsa-miR-670 |
cagccCAGGGAactggtct |
1 |
GUCCCUGA | m6b | Disrupted | -0.135 | no TS |
-3.34 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr15:g.96785220G>A | cosmic_v64_1838360 | Melanoma | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3934 |
tacCACCTGAaactcacct |
0 | UCAGGUGU | m7a | (m6a->m7a) | no TS | -0.148 |
-0.05 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr15:g.96785235G>A | cosmic_v64_1838364 | Melanoma | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3157-3p |
acctggaaAGGGCAatcag |
0 | CUGCCCUA | m6b | Disrupted | -0.662 | -0.484 | No effect |
hsa-miR-874 |
acctggaaAGGGCAatcag |
0 | CUGCCCUG | m6b | Disrupted | -0.344 | -0.18 |
0.01 |
hsa-miR-938 |
acctggaAAGGGCAatcag |
2 |
UGCCCUUA | m7a | Disrupted | -0.172 | no TS |
8.18 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr15:g.96785241T>A | COSN6078317 | RK212_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr15:g.96785249C>T | cosmic_v64_1838393 | Melanoma | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr15:g.96785290C>T | cosmic_v64_1838360 | Melanoma | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3529-5p |
agtttctgtTCTACCagtg |
0 | AGGUAGAC | m6b | Created | no TS | -0.114 |
-0.83 |
hsa-miR-4650-3p |
agtttctgTTCTACCagtg |
0 | AGGUAGAA | m7b | Created | no TS | -0.249 |
-7.75 |
hsa-miR-4773 |
agtttCTGTTCTaccagtg |
0 | CAGAACAG | m7b | Created | no TS | -0.238 |
-8.79 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr15:g.96785505A>C | COSN7256243 | 8035603 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-431-5p |
tataggGCAAGACActgtt |
7 |
UGUCUUGC | m8a | Disrupted | -0.315000 | no TS |
0.310000 |
hsa-miR-4711-3p |
tatagggcAAGACACtgtt |
9 |
CGUGUCUU | m7b | Disrupted | -0.120000 | no TS |
1.700000 |