| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
| Home | Search | Help | Download | |||||
| RefSeq ID: | NM_022454 |
|---|---|
| Gene Symbol: | SOX17 |
| Description: | Homo sapiens SRY (sex determining region Y)-box 17 (SOX17), mRNA. |
| Gene Location: | chr8(+):55370494-55373456 |
| Browse Associations | |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr8:g.54460714C>T | 4_1892 | UNP758168 | Acute myeloid leukemia | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3192 |
ttgacctgCTCCCAGAggc |
0 | UCUGGGAG | m8a | Created | no TS | -0.347 |
-12.61 |
| hsa-miR-4300 |
ttgacctGCTCCCAgaggc |
0 | UGGGAGCU | m7a | Created | no TS | -0.185 |
-3.19 |
| hsa-miR-4488 |
ttgacctGCCCCCagaggc |
0 | AGGGGGCG | m6b | Disrupted | -0.227 | no TS |
21.64 |
| hsa-miR-4697-5p |
ttgacctGCCCCCagaggc |
0 | AGGGGGCG | m6b | Disrupted | -0.237 | no TS |
13.04 |
| hsa-miR-4736 |
ttgACCTGCCcccagaggc |
10 |
AGGCAGGU | m7b | (m7b->m6b) | -0.169 | no TS |
0.88 |
| hsa-miR-486-3p |
ttgacCTGCCCCcagaggc |
0 | CGGGGCAG | m7b | Disrupted | -0.216 | no TS |
1.71 |
| hsa-miR-5591-5p |
ttgacctGCTCCCAgaggc |
0 | UGGGAGCU | m7a | Created | no TS | -0.185 |
-6.65 |
| hsa-miR-637 |
ttgacctgCCCCCAGaggc |
0 | ACUGGGGG | m7b | Disrupted | -0.407 | no TS |
2.06 |
| hsa-miR-920 |
ttgacctGCTCCCagaggc |
0 | GGGGAGCU | m6b | Created | no TS | -0.196 |
-0.45 |