SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_152760
Gene Symbol:	SNX32
Description:	Homo sapiens sorting nexin 32 (SNX32), mRNA.
Gene Location:	chr11(+):65601409-65621172
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr11:g.65853551G>T			COSN1136404		HCC128T		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3138	tcataacTGTCCACAgtca	0	UGUGGACA	m8a	Created	no TS	-0.319000	-3.280000
hsa-miR-4435	tcataaCTGGCCAcagtca	1	AUGGCCAG	m7b	Disrupted	-0.201000	no TS	2.750000
hsa-miR-4520a-3p	tcataaCTGTCCAcagtca	0	UUGGACAG	m7b	Created	no TS	-0.185000	-6.910000
hsa-miR-4800-5p	tcataactGTCCACagtca	0	AGUGGACC	m6b	Created	no TS	-0.149000	0.029000
hsa-miR-663b	tcataactGGCCACagtca	8	GGUGGCCC	m6b	Disrupted	-0.179000	no TS	9.130000
hsa-miR-3138	tcataacTGTCCACAgtca	0	UGUGGACA	m8a	Created	no TS	-0.319000	-3.280000
hsa-miR-4435	tcataaCTGGCCAcagtca	1	AUGGCCAG	m7b	Disrupted	-0.201000	no TS	2.750000
hsa-miR-4520a-3p	tcataaCTGTCCAcagtca	0	UUGGACAG	m7b	Created	no TS	-0.185000	-6.910000
hsa-miR-4800-5p	tcataactGTCCACagtca	0	AGUGGACC	m6b	Created	no TS	-0.149000	0.029000
hsa-miR-663b	tcataactGGCCACagtca	8	GGUGGCCC	m6b	Disrupted	-0.179000	no TS	9.130000
hsa-miR-3138	tcataacTGTCCACAgtca	0	UGUGGACA	m8a	Created	no TS	-0.319	-3.28
hsa-miR-4435	tcataaCTGGCCAcagtca	1	AUGGCCAG	m7b	Disrupted	-0.201	no TS	2.75
hsa-miR-4520a-3p	tcataaCTGTCCAcagtca	0	UUGGACAG	m7b	Created	no TS	-0.185	-6.91
hsa-miR-4800-5p	tcataactGTCCACagtca	0	AGUGGACC	m6b	Created	no TS	-0.149	0.029
hsa-miR-663b	tcataactGGCCACagtca	0	GGUGGCCC	m6b	Disrupted	-0.179	no TS	9.13

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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