SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_152760 |
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Gene Symbol: | SNX32 |
Description: | Homo sapiens sorting nexin 32 (SNX32), mRNA. |
Gene Location: | chr11(+):65601409-65621172 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.65853551G>T | COSN1136404 | HCC128T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3138 |
tcataacTGTCCACAgtca |
0 | UGUGGACA | m8a | Created | no TS | -0.319000 |
-3.280000 |
hsa-miR-4435 |
tcataaCTGGCCAcagtca |
1 |
AUGGCCAG | m7b | Disrupted | -0.201000 | no TS |
2.750000 |
hsa-miR-4520a-3p |
tcataaCTGTCCAcagtca |
0 | UUGGACAG | m7b | Created | no TS | -0.185000 |
-6.910000 |
hsa-miR-4800-5p |
tcataactGTCCACagtca |
0 | AGUGGACC | m6b | Created | no TS | -0.149000 |
0.029000 |
hsa-miR-663b |
tcataactGGCCACagtca |
8 |
GGUGGCCC | m6b | Disrupted | -0.179000 | no TS |
9.130000 |
hsa-miR-3138 |
tcataacTGTCCACAgtca |
0 | UGUGGACA | m8a | Created | no TS | -0.319000 |
-3.280000 |
hsa-miR-4435 |
tcataaCTGGCCAcagtca |
1 |
AUGGCCAG | m7b | Disrupted | -0.201000 | no TS |
2.750000 |
hsa-miR-4520a-3p |
tcataaCTGTCCAcagtca |
0 | UUGGACAG | m7b | Created | no TS | -0.185000 |
-6.910000 |
hsa-miR-4800-5p |
tcataactGTCCACagtca |
0 | AGUGGACC | m6b | Created | no TS | -0.149000 |
0.029000 |
hsa-miR-663b |
tcataactGGCCACagtca |
8 |
GGUGGCCC | m6b | Disrupted | -0.179000 | no TS |
9.130000 |
hsa-miR-3138 |
tcataacTGTCCACAgtca |
0 | UGUGGACA | m8a | Created | no TS | -0.319 |
-3.28 |
hsa-miR-4435 |
tcataaCTGGCCAcagtca |
1 |
AUGGCCAG | m7b | Disrupted | -0.201 | no TS |
2.75 |
hsa-miR-4520a-3p |
tcataaCTGTCCAcagtca |
0 | UUGGACAG | m7b | Created | no TS | -0.185 |
-6.91 |
hsa-miR-4800-5p |
tcataactGTCCACagtca |
0 | AGUGGACC | m6b | Created | no TS | -0.149 |
0.029 |
hsa-miR-663b |
tcataactGGCCACagtca |
0 | GGUGGCCC | m6b | Disrupted | -0.179 | no TS |
9.13 |