SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_018968
Gene Symbol: SNTG2
Description: Homo sapiens syntrophin, gamma 2 (SNTG2), mRNA.
Gene Location: chr2(+):946553-1371384
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.1367575T>C COSN1789952 RK133_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1183 atgagcCTACAGTtgtgat
 0 CACUGUAG m7b Created no TS -0.154000 -1.770000
hsa-miR-1295b-3p atgaGCCTATagttgtgat
 10
 AAUAGGCC m6b Disrupted -0.187000 no TS 7.080000
hsa-miR-625-3p atgagcCTATAGTtgtgat
 13
 GACUAUAG m7b Disrupted -0.134000 no TS -0.560000
hsa-miR-1183 atgagcCTACAGTtgtgat
 0 CACUGUAG m7b Created no TS -0.154 -1.77
hsa-miR-1295b-3p atgaGCCTATagttgtgat
 10
 AAUAGGCC m6b Disrupted -0.187 no TS 7.08
hsa-miR-625-3p atgagcCTATAGTtgtgat
 13
 GACUAUAG m7b Disrupted -0.134 no TS -0.56

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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