SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_021734
Gene Symbol: SLC25A19
Description: Homo sapiens solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 (SLC25A19), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.
Gene Location: chr17(-):73269060-73285530
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.75273191G>T COSN15454110 AOCS-086-1-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3916 ttcTCCTCTTaccagccca
 0 AAGAGGAA m7a (m6b->m7a) NA NA 0.810000
hsa-miR-4257 ttctCCTCTGaccagccca
 2
 CCAGAGGU m6b Disrupted -0.089000 no TS 0.870000
hsa-miR-4490 ttctcctcTTACCAGccca
 0 UCUGGUAA m7b Created no TS -0.071000 -0.520000
hsa-miR-3916 ttcTCCTCTTaccagccca
 0 AAGAGGAA m7a (m6b->m7a) NA NA 0.810000
hsa-miR-4257 ttctCCTCTGaccagccca
 2
 CCAGAGGU m6b Disrupted -0.089000 no TS 0.870000
hsa-miR-4490 ttctcctcTTACCAGccca
 0 UCUGGUAA m7b Created no TS -0.071000 -0.520000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Genome Browser