SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001145144
Gene Symbol: SLC1A5
Description: Homo sapiens solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5), transcript variant 2, mRNA.
Gene Location: chr19(-):47278139-47290545
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.46775154G>T COSN6145609 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-361-3p ccaCTGGGGGgatgttaca
 0 UCCCCCAG m7b (m7b->m6c) -0.589000 -0.382000 1.120000
hsa-miR-499a-3p ccactgggGTGATGTTaca
 0 AACAUCAC m8a Created no TS -0.098000 -3.060000
hsa-miR-499b-3p ccactgggGTGATGTTaca
 0 AACAUCAC m8a Created no TS -0.098000 -1.950000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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