SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_001146037
Gene Symbol:	SLC14A1
Description:	Homo sapiens solute carrier family 14 (urea transporter), member 1 (Kidd blood group) (SLC14A1), transcript variant 1, mRNA.
Gene Location:	chr18(+):43306917-43332485
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr18:g.45751222T>C			ICGC_B0992398-2A78-11E2-8335-12FD496BB9B8		CPCG_0102_Pr_P_P2		ProstateCancer(OICR,CA)
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3199	gcctgtAGTCCCagctact	0	AGGGACUG	m6b	Created	-0.129	-0.127	No effect
hsa-miR-365a-5p	gcctgtAGTCCCagctact	0	AGGGACUU	m6b	Created	no TS	-0.008	No effect
hsa-miR-365b-5p	gcctgtAGTCCCagctact	0	AGGGACUU	m6b	Created	no TS	-0.008	-0.64

Mutation			Mutation ID		Sample Name		Cancer Type
chr18:g.45751356A>C			9_36386		CRC-4-Tumor		Colorectal adenocarcinoma
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-5010-3p	aaaaaaaaACACAAAcaaa	1	UUUUGUGU	m7b	Created	-0.086	-0.141	-3.15
hsa-miR-599	aaaaaaaaACACAAacaaa	1	GUUGUGUC	m6b	Created	-0.067	-0.074	-1.0

Mutation			Mutation ID		Sample Name		Cancer Type
chr18:g.45752178G>C			COSN6124676		RK162_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-642b-5p	tcttgttAGGGAACgtgtg	2	GGUUCCCU	m7b	Disrupted	-0.432000	-0.198000	No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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