SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001101341
Gene Symbol: SFTA3
Description: Homo sapiens surfactant associated 3 (SFTA3), mRNA.
Gene Location: chr14(-):36942493-36982990
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.36473750T>C COSN1646217 RK166_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-616-3p cagagctAATGACagaatt
 1
 AGUCAUUG m6b Disrupted -0.067000 no TS 2.220000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Genome Browser