SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001243491
Gene Symbol: SETDB1
Description: Homo sapiens SET domain, bifurcated 1 (SETDB1), transcript variant 1, mRNA.
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.150945224T>C COSN1405864 RK086_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4789-3p atcctcgTATGTGTtctca
 0 CACACAUA m7b Disrupted -0.084000 no TS 2.780000
hsa-miR-4789-3p atcctcgTATGTGTtctca
 0 CACACAUA m7b Disrupted -0.084 no TS 2.78

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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