SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001122607
Gene Symbol: RUNX1
Description: Homo sapiens runt-related transcription factor 1 (RUNX1), transcript variant 2, mRNA.
Gene Location: chr21(-):36193573-36260987
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.34821357T>C COSN14444856 8029781 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1277-5p tttgagATATATTTttatc
 4
 AAAUAUAU m8a Disrupted -0.026000 no TS 2.980000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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