SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_002947 |
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Gene Symbol: | RPA3 |
Description: | Homo sapiens replication protein A3, 14kDa (RPA3), mRNA. |
Gene Location: | chr7(-):7676574-7758238 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr7:g.7636947G>T | COSN14654045 | PCSI_0090_Pa_X | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4729 |
tctatTAAATGAa |
1 |
UCAUUUAU | m7a | Created | 0.001000 | -0.040000 |
-1.540000 |
hsa-miR-5696 |
tctatTAAATGAa |
1 |
CUCAUUUA | m7b | Created | -0.052000 | -0.285000 |
-4.000000 |
hsa-miR-579 |
tctattAAATGAa |
0 | UUCAUUUG | m6b | Created | no TS | -0.051000 |
-4.990000 |
hsa-miR-644b-3p |
tctattAAATGAa |
0 | UUCAUUUG | m6b | Created | no TS | -0.044000 |
-1.630000 |
hsa-miR-4729 |
tctatTAAATGAa |
1 |
UCAUUUAU | m7a | Created | 0.001000 | -0.040000 |
-1.540000 |
hsa-miR-5696 |
tctatTAAATGAa |
1 |
CUCAUUUA | m7b | Created | -0.052000 | -0.285000 |
-4.000000 |
hsa-miR-579 |
tctattAAATGAa |
0 | UUCAUUUG | m6b | Created | no TS | -0.051000 |
-4.990000 |
hsa-miR-644b-3p |
tctattAAATGAa |
0 | UUCAUUUG | m6b | Created | no TS | -0.044000 |
-1.630000 |