SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_002947
Gene Symbol: RPA3
Description: Homo sapiens replication protein A3, 14kDa (RPA3), mRNA.
Gene Location: chr7(-):7676574-7758238
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.7636947G>T COSN14654045 PCSI_0090_Pa_X [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4729 tctatTAAATGAa
 1
 UCAUUUAU m7a Created 0.001000 -0.040000 -1.540000
hsa-miR-5696 tctatTAAATGAa
 1
 CUCAUUUA m7b Created -0.052000 -0.285000 -4.000000
hsa-miR-579 tctattAAATGAa
 0 UUCAUUUG m6b Created no TS -0.051000 -4.990000
hsa-miR-644b-3p tctattAAATGAa
 0 UUCAUUUG m6b Created no TS -0.044000 -1.630000
hsa-miR-4729 tctatTAAATGAa
 1
 UCAUUUAU m7a Created 0.001000 -0.040000 -1.540000
hsa-miR-5696 tctatTAAATGAa
 1
 CUCAUUUA m7b Created -0.052000 -0.285000 -4.000000
hsa-miR-579 tctattAAATGAa
 0 UUCAUUUG m6b Created no TS -0.051000 -4.990000
hsa-miR-644b-3p tctattAAATGAa
 0 UUCAUUUG m6b Created no TS -0.044000 -1.630000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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