SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_020216 |
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Gene Symbol: | RNPEP |
Description: | Homo sapiens arginyl aminopeptidase (aminopeptidase B) (RNPEP), mRNA. |
Gene Location: | chr1(+):201951765-201975275 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.202005801->A | ICGC_ssm_v3_48807 | HCC118T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4772-5p |
tcCCTGATCAacttcctgg |
1 |
UGAUCAGG | m8a | (m8a->m7a) | -0.408000 | -0.417000 |
-0.820000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.202005897A>G | COSN1096106 | HCC61T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3919 |
tacTTCTCTGtagcccact |
0 | GCAGAGAA | m7b | (m6b->m7b) | no TS | -0.074000 |
-0.010000 |
hsa-miR-3976 |
tactTCTCTATAgcccact |
1 |
UAUAGAGA | m8a | Disrupted | -0.233000 | no TS |
0.030000 |
hsa-miR-4797-5p |
tacttCTCTGTagcccact |
0 | GACAGAGU | m6b | Created | no TS | -0.058000 | No effect |
hsa-miR-548v |
tacttctCTGTAGCccact |
0 | AGCUACAG | m7b | Created | no TS | -0.142000 |
-4.300000 |
hsa-miR-3919 |
tacTTCTCTGtagcccact |
0 | GCAGAGAA | m7b | (m6b->m7b) | no TS | -0.074000 |
-0.010000 |
hsa-miR-3976 |
tactTCTCTATAgcccact |
1 |
UAUAGAGA | m8a | Disrupted | -0.233000 | no TS |
0.030000 |
hsa-miR-4797-5p |
tacttCTCTGTagcccact |
0 | GACAGAGU | m6b | Created | no TS | -0.058000 | No effect |
hsa-miR-548v |
tacttctCTGTAGCccact |
0 | AGCUACAG | m7b | Created | no TS | -0.142000 |
-4.300000 |
hsa-miR-3919 |
tacTTCTCTGtagcccact |
0 | GCAGAGAA | m7b | (m6b->m7b) | no TS | -0.074000 |
-0.010000 |
hsa-miR-3976 |
tactTCTCTATAgcccact |
1 |
UAUAGAGA | m8a | Disrupted | -0.233000 | no TS |
0.030000 |
hsa-miR-4797-5p |
tacttCTCTGTagcccact |
0 | GACAGAGU | m6b | Created | no TS | -0.058000 | No effect |
hsa-miR-548v |
tacttctCTGTAGCccact |
0 | AGCUACAG | m7b | Created | no TS | -0.142000 |
-4.300000 |
hsa-miR-3919 |
tacTTCTCTGtagcccact |
0 | GCAGAGAA | m7b | (m6b->m7b) | no TS | -0.074 |
-0.01 |
hsa-miR-3976 |
tactTCTCTATAgcccact |
1 |
UAUAGAGA | m8a | Disrupted | -0.233 | no TS |
0.03 |
hsa-miR-4797-5p |
tacttCTCTGTagcccact |
0 | GACAGAGU | m6b | Created | no TS | -0.058 | No effect |
hsa-miR-548v |
tacttctCTGTAGCccact |
0 | AGCUACAG | m7b | Created | no TS | -0.142 |
-4.3 |