SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001242846 |
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Gene Symbol: | RNF146 |
Description: | Homo sapiens ring finger protein 146 (RNF146), transcript variant 1, mRNA. |
Gene Location: | chr6(+):127587982-127609705 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.127287731G>T | COSN8493601 | 824_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-652-5p |
ggttgaaAGGGTTacctgt |
0 | CAACCCUA | m6b | Disrupted | -0.155000 | no TS |
2.840000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.127288310T>A | COSN2140278 | RK032_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-577 |
tctgcaTTTATCTttttga |
0 | UAGAUAAA | m7b | Created | no TS | -0.099000 |
-1.010000 |
hsa-miR-577 |
tctgcaTTTATCTttttga |
0 | UAGAUAAA | m7b | Created | no TS | -0.099000 |
-1.010000 |
hsa-miR-577 |
tctgcaTTTATCTttttga |
0 | UAGAUAAA | m7b | Created | no TS | -0.099 |
-1.01 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.127288335T>G | COSN8493602 | J36_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-944 |
aatttATAATTTaataaat |
1 |
AAAUUAUU | m7a | Disrupted | 0.025000 | 0.025000 |
1.638600 |