SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_206854 |
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Gene Symbol: | QKI |
Description: | Homo sapiens QKI, KH domain containing, RNA binding (QKI), transcript variant 1, mRNA. |
Gene Location: | chr6(+):163835674-163999628 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163564862C>T | COSN7698118 | 8016470 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-421 |
gcatgcatgCTGTTGActt |
16 |
AUCAACAG | m7b | (m7b->m6c) | -0.067000 | 0.063000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163565746T>G | COSN5625829 | RK043_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-338-5p |
aaaatTATTGTaaatttct |
20 |
AACAAUAU | m6b | Created | 0.564000 | 0.590000 |
-0.120000 |
hsa-miR-5692a |
aaaATTATTTtaaatttct |
1 |
CAAAUAAU | m7b | (m7b->m6b) | 3.859000 | 3.813000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163565972G>T | cosmic_v64_1651109 | Colorectal | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-126-5p |
aaaggcTAATAATtcaaga |
0 | CAUUAUUA | m7b | Created | 0.614 | 0.818 |
-0.01 |
hsa-miR-183-3p |
aaaggctaaTAATTCAaga |
0 | GUGAAUUA | m7b | (m6c->m7b) | 0.362 | 0.382 |
-5.72 |
hsa-miR-4452 |
aaaggctaaGAATTCAAga |
0 | UUGAAUUC | m8a | (m8a->m7b) | 0.078 | 0.15 |
6.19 |
hsa-miR-944 |
aaaggctAATAATTcaaga |
0 | AAAUUAUU | m7b | Created | 1.374 | 1.537 |
-0.02 |
hsa-miR-126-5p |
aaaggcTAATAATtcaaga |
19 |
CAUUAUUA | m7b | Created | 0.614000 | 0.818000 | No effect |
hsa-miR-183-3p |
aaaggctaaTAATTCAaga |
19 |
GUGAAUUA | m7b | (m6c->m7b) | 0.362000 | 0.382000 |
-0.110000 |
hsa-miR-4452 |
aaaggctaaGAATTCAAga |
18 |
UUGAAUUC | m8a | (m8a->m7b) | 0.078000 | 0.150000 |
4.270000 |
hsa-miR-944 |
aaaggctAATAATTcaaga |
12 |
AAAUUAUU | m7b | Created | 1.374000 | 1.537000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163566360A>G | COSN2151770 | RK006_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-374c-5p |
attgtcTGTATTAaacatg |
0 | AUAAUACA | m7b | Disrupted | 0.190000 | no TS |
0.020000 |
hsa-miR-655 |
attgtcTGTATTAaacatg |
0 | AUAAUACA | m7b | Disrupted | 0.179000 | no TS |
0.290000 |
hsa-miR-374c-5p |
attgtcTGTATTAaacatg |
0 | AUAAUACA | m7b | Disrupted | 0.190000 | no TS |
0.020000 |
hsa-miR-655 |
attgtcTGTATTAaacatg |
0 | AUAAUACA | m7b | Disrupted | 0.179000 | no TS |
0.290000 |
hsa-miR-374c-5p |
attgtcTGTATTAaacatg |
0 | AUAAUACA | m7b | Disrupted | 0.19 | no TS |
0.02 |
hsa-miR-655 |
attgtcTGTATTAaacatg |
0 | AUAAUACA | m7b | Disrupted | 0.179 | no TS |
0.29 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163566624G>A | COSN8795413 | SS6003314 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-33a-3p |
gtagtaaatAAACATTtga |
13 |
CAAUGUUU | m7b | (m6c->m7b) | 1.031000 | 1.121000 | No effect |
hsa-miR-4729 |
gtagTAAATGAacatttga |
10 |
UCAUUUAU | m7a | Disrupted | 1.087000 | 0.946000 |
0.010000 |
hsa-miR-5696 |
gtagTAAATGAacatttga |
10 |
CUCAUUUA | m7b | Disrupted | 1.418000 | 1.172000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163566638C>A | COSN1328379 | HCC102T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1246 |
tttgaAATCCATTttgata |
0 | AAUGGAUU | m8a | Disrupted | 0.085000 | 0.097000 |
0.030000 |
hsa-miR-3167 |
tttGAAATCCattttgata |
14 |
AGGAUUUC | m7b | (m7b->m6b) | 0.020000 | 0.075000 |
0.250000 |
hsa-miR-4694-3p |
tttgaaaTCCATTTtgata |
0 | CAAAUGGA | m7b | Disrupted | 0.001000 | -0.019000 | No effect |
hsa-miR-4698 |
tttgaaatcCATTTTGAta |
2 |
UCAAAAUG | m8a | (m8a->m7b) | 1.149000 | 1.106000 | No effect |
hsa-miR-876-5p |
tttGAAATCCAttttgata |
14 |
UGGAUUUC | m8a | Disrupted | 0.041000 | 0.075000 |
0.100000 |
hsa-miR-1246 |
tttgaAATCCATTttgata |
0 | AAUGGAUU | m8a | Disrupted | 0.085000 | 0.097000 |
0.030000 |
hsa-miR-3167 |
tttGAAATCCattttgata |
14 |
AGGAUUUC | m7b | (m7b->m6b) | 0.020000 | 0.075000 |
0.250000 |
hsa-miR-4694-3p |
tttgaaaTCCATTTtgata |
0 | CAAAUGGA | m7b | Disrupted | 0.001000 | -0.019000 | No effect |
hsa-miR-4698 |
tttgaaatcCATTTTGAta |
2 |
UCAAAAUG | m8a | (m8a->m7b) | 1.149000 | 1.106000 | No effect |
hsa-miR-876-5p |
tttGAAATCCAttttgata |
14 |
UGGAUUUC | m8a | Disrupted | 0.041000 | 0.075000 |
0.100000 |
hsa-miR-1246 |
tttgaAATCCATTttgata |
14 |
AAUGGAUU | m8a | Disrupted | 0.085 | 0.097 |
5.06 |
hsa-miR-3167 |
tttGAAATCCattttgata |
14 |
AGGAUUUC | m7b | (m7b->m6b) | 0.02 | 0.075 |
0.25 |
hsa-miR-4694-3p |
tttgaaaTCCATTTtgata |
15 |
CAAAUGGA | m7b | Disrupted | 0.001 | -0.019 | No effect |
hsa-miR-4698 |
tttgaaatcCATTTTGAta |
0 | UCAAAAUG | m8a | (m8a->m7b) | 1.149 | 1.106 |
-4.54 |
hsa-miR-876-5p |
tttGAAATCCAttttgata |
14 |
UGGAUUUC | m8a | Disrupted | 0.041 | 0.075 |
4.35 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163569163G>A | COSN9500662 | AOCS-064-3-3 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-376a-3p |
ttctTCTATGATtttggag |
2 |
AUCAUAGA | m8a | Disrupted | 0.122000 | 0.211000 |
4.610000 |
hsa-miR-376b |
ttctTCTATGATtttggag |
2 |
AUCAUAGA | m8a | Disrupted | 0.140000 | 0.229000 |
6.390000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163569587C>A | COSN9500663 | AOCS-056-1-X | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-219-1-3p |
aggaaggaaCAACTCaagg |
13 |
AGAGUUGA | m6b | Disrupted | 0.084000 | 0.052000 | No effect |
hsa-miR-4326 |
aggaAGGAACAactcaagg |
8 |
UGUUCCUC | m7a | Disrupted | 0.029000 | no TS |
7.980000 |
hsa-miR-571 |
aggaaggaaCAACTCAagg |
13 |
UGAGUUGG | m7a | (m7a->m6b) | -0.001000 | -0.032000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163570033T>G | COSN2151771 | RK126_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-196a-3p |
gaTGTTGCCGacactgcta |
11 |
CGGCAACA | m8a | (m7a->m8a) | -0.176000 | -0.148000 |
0.010000 |
hsa-miR-4280 |
gatgttgcCTACACTgcta |
12 |
GAGUGUAG | m7b | Disrupted | 0.072000 | no TS | No effect |
hsa-miR-196a-3p |
gaTGTTGCCGacactgcta |
0 | CGGCAACA | m8a | (m7a->m8a) | -0.176 | -0.148 | No effect |
hsa-miR-4280 |
gatgttgcCTACACTgcta |
0 | GAGUGUAG | m7b | Disrupted | 0.072 | no TS | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163570614G>A | COSN1328381 | HCC125T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1245a |
cattaagccATCACTagct |
1 |
AAGUGAUC | m6b | Created | 0.024000 | 0.084000 |
-0.070000 |
hsa-miR-135a-5p |
cattAAGCCATcactagct |
2 |
UAUGGCUU | m7b | Created | -0.217000 | -0.230000 | No effect |
hsa-miR-135b-5p |
cattAAGCCATcactagct |
2 |
UAUGGCUU | m7b | Created | -0.217000 | -0.230000 | No effect |
hsa-miR-1245a |
cattaagccATCACTagct |
1 |
AAGUGAUC | m6b | Created | 0.024000 | 0.084000 |
-0.070000 |
hsa-miR-135a-5p |
cattAAGCCATcactagct |
2 |
UAUGGCUU | m7b | Created | -0.217000 | -0.230000 | No effect |
hsa-miR-135b-5p |
cattAAGCCATcactagct |
2 |
UAUGGCUU | m7b | Created | -0.217000 | -0.230000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163570682C>T | COSN5273077 | SNUH_G17_S1 | [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-548ac |
tttttGTTTTTaaccaccc |
6 |
CAAAAACC | m6b | Created | 1.015000 | 1.193000 |
0.080000 |
hsa-miR-548ae |
tttttGTTTTTaaccaccc |
0 | CAAAAACU | m6b | Created | 2.299000 | 2.477000 |
0.020000 |
hsa-miR-548ah-3p |
tttttGTTTTTaaccaccc |
0 | CAAAAACU | m6b | Created | 2.281000 | 2.459000 |
0.010000 |
hsa-miR-548aj-3p |
tttttGTTTTTAaccaccc |
0 | UAAAAACU | m7a | Created | 2.269000 | 2.447000 |
0.020000 |
hsa-miR-548am-3p |
tttttGTTTTTaaccaccc |
0 | CAAAAACU | m6b | Created | 2.281000 | 2.459000 |
0.010000 |
hsa-miR-548aq-3p |
tttttGTTTTTaaccaccc |
0 | CAAAAACU | m6b | Created | 2.280000 | 2.458000 |
0.010000 |
hsa-miR-548d-3p |
tttttGTTTTTaaccaccc |
6 |
CAAAAACC | m6b | Created | 1.053000 | 1.242000 | No effect |
hsa-miR-548h-3p |
tttttGTTTTTaaccaccc |
6 |
CAAAAACC | m6b | Created | 1.001000 | 1.176000 | No effect |
hsa-miR-548x-3p |
tttttGTTTTTAaccaccc |
0 | UAAAAACU | m7a | Created | 2.299000 | 2.477000 |
0.030000 |
hsa-miR-548z |
tttttGTTTTTaaccaccc |
6 |
CAAAAACC | m6b | Created | 1.001000 | 1.176000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163570791G>A | COSN167932 | GC7_T | [stomach][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4484 |
ctggtaatCGCCTTTgctt |
21 |
AAAAGGCG | m7b | Disrupted | 0.002000 | no TS | No effect |
hsa-miR-4484 |
ctggtaatCGCCTTTgctt |
0 | AAAAGGCG | m7b | Disrupted | 0.002 | no TS | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163570871G>A | COSN8871390 | SNUH_G22_S1 | [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-129-5p |
aaagaCAAAAAaattgttg |
0 | CUUUUUGC | m6b | Created | 0.271000 | 0.441000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163571171G>C | 11_20124 | 2542 | Breast cancer | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1255a |
atgcaTCATCCatgaacct |
34 |
AGGAUGAG | m6b | Created | no TS | 0.038 |
-0.01 |
hsa-miR-1255b-5p |
atgcaTCATCCatgaacct |
34 |
CGGAUGAG | m6b | Created | no TS | 0.038 | No effect |
hsa-miR-1322 |
atGCATCATCcatgaacct |
32 |
GAUGAUGC | m8a | (m7a->m8a) | -0.218 | -0.218 | No effect |
hsa-miR-490-5p |
atgcatcATCCATGaacct |
33 |
CCAUGGAU | m7b | Created | -0.031 | 0.043 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163571672A>T | COSN9500664 | AOCS-166-1-2 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-5011-5p |
gcagaaaaaTATATATAta |
10 |
UAUAUAUA | m8a | (m7b->m8a) | 3.734000 | 3.911000 |
0.500000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163571730A>G | COSN2151772 | RK068_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163572682G>C | COSN1328382 | HX13T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1228-5p |
cccccccCCGCCCAgctta |
0 | GUGGGCGG | m7b | Disrupted | -0.048000 | no TS |
1.870000 |
hsa-miR-1908 |
cccccCCCCGCCcagctta |
0 | CGGCGGGG | m7b | Disrupted | -0.016000 | no TS |
-0.470000 |
hsa-miR-4486 |
ccccccccCGCCCAGCtta |
17 |
GCUGGGCG | m8a | Disrupted | -0.186000 | -0.211000 |
0.310000 |
hsa-miR-4731-5p |
cccccccccCCCCAGCtta |
0 | UGCUGGGG | m7b | (m6c->m7b) | -0.662000 | -0.618000 |
-0.960000 |
hsa-miR-637 |
ccccccccCCCCCAGctta |
0 | ACUGGGGG | m7b | Created | -0.274000 | -0.262000 |
-0.920000 |
hsa-miR-663a |
cccccCCCCGCCcagctta |
0 | AGGCGGGG | m7b | Disrupted | -0.044000 | no TS |
0.010000 |
hsa-miR-1228-5p |
cccccccCCGCCCAgctta |
0 | GUGGGCGG | m7b | Disrupted | -0.048 | no TS |
1.87 |
hsa-miR-1908 |
cccccCCCCGCCcagctta |
0 | CGGCGGGG | m7b | Disrupted | -0.016 | no TS |
-0.47 |
hsa-miR-4486 |
ccccccccCGCCCAGCtta |
0 | GCUGGGCG | m8a | Disrupted | -0.186 | -0.211 |
0.31 |
hsa-miR-4731-5p |
cccccccccCCCCAGCtta |
0 | UGCUGGGG | m7b | (m6c->m7b) | -0.662 | -0.618 |
-0.96 |
hsa-miR-637 |
ccccccccCCCCCAGctta |
0 | ACUGGGGG | m7b | Created | -0.274 | -0.262 |
-0.92 |
hsa-miR-663a |
cccccCCCCGCCcagctta |
0 | AGGCGGGG | m7b | Disrupted | -0.044 | no TS |
0.01 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163572869A>G | COSN5085497 | HX33T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163573600->T | ICGC_sm59419 | RK006_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-182-5p |
aactgaaaaTTGCCAAttg |
0 | UUUGGCAA | m7b | (m7b->m6c) | -0.056000 | -0.060000 |
0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163574119C>T | COSN6312181 | RK191_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-203 |
ttactaATTTCACacctta |
6 |
GUGAAAUG | m7a | Created | 0.441000 | 0.441000 | No effect |
hsa-miR-3911 |
ttactaatTCCACACctta |
11 |
UGUGUGGA | m7b | Disrupted | -0.139000 | -0.062000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163574335T>G | COSN15346809 | 0093_CRUK_PC_0093_T1_DNA | [prostate][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3148 |
aacttgaccTTTTTCCttt |
2 |
UGGAAAAA | m7b | (m7b->m6c) | 0.887000 | 0.747000 | No effect |
hsa-miR-3974 |
aactTGACCTTTttccttt |
21 |
AAAGGUCA | m8a | Disrupted | -0.258000 | -0.191000 | No effect |
hsa-miR-553 |
aacttgACCGTTTTccttt |
0 | AAAACGGU | m8a | Created | no TS | -0.040000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163574350G>T | COSN6312182 | RK136_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4315 |
ctttgGAAAGCGttgaact |
0 | CCGCUUUC | m7b | Disrupted | -0.316000 | -0.228000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163574494C>G | COSN14920164 | CHC433T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3915 |
ctgagctTTCCTCAggtat |
2 |
UUGAGGAA | m7b | Disrupted | 0.005000 | -0.034000 |
0.010000 |
hsa-miR-3928 |
ctgagctTTCCTCaggtat |
2 |
GGAGGAAC | m6b | Disrupted | 0.080000 | 0.020000 | No effect |
hsa-miR-4496 |
ctgagcTTTCCTCaggtat |
1 |
GAGGAAAC | m7a | Disrupted | 0.002000 | 0.002000 |
0.010000 |
hsa-miR-544b |
ctgagctttCCTCAGGTat |
2 |
ACCUGAGG | m8a | (m8a->m7b) | -0.235000 | -0.137000 |
0.310000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163575386T>C | COSN14883529 | LP6005500-DNA_B03 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3686 |
caTTACAGATttcattttt |
11 |
AUCUGUAA | m8a | (m8a->m7a) | -0.056000 | -0.029000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163575562->G | cosmic_v64_1870281 | NA | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-125a-5p |
caaaatgTCAGGGAaaact |
2 |
UCCCUGAG | m7a | Disrupted | -0.129000 | -0.071000 | No effect |
hsa-miR-125b-5p |
caaaatgTCAGGGAaaact |
2 |
UCCCUGAG | m7a | Disrupted | -0.123000 | -0.065000 | No effect |
hsa-miR-331-3p |
caaaatgtCAGGGGaaaact |
0 | GCCCCUGG | m6b | Created | -0.035000 | -0.107000 |
-0.920000 |
hsa-miR-345-3p |
caaaatgTCAGGGaaaact |
2 |
GCCCUGAA | m6b | Disrupted | -0.173000 | -0.126000 |
0.010000 |
hsa-miR-4319 |
caaaatgTCAGGGAaaact |
2 |
UCCCUGAG | m7a | Disrupted | -0.109000 | -0.051000 |
0.470000 |
hsa-miR-4446-5p |
caaaatgtcAGGGAAAact |
0 | AUUUCCCU | m7b | (m7b->m6c) | 0.139000 | 0.118000 |
1.220000 |
hsa-miR-4732-3p |
caaaatGTCAGGGaaaact |
2 |
GCCCUGAC | m7b | Disrupted | -0.334000 | -0.271000 |
0.020000 |
hsa-miR-4755-5p |
caaaatgtcAGGGAAAact |
0 | UUUCCCUU | m7a | (m7a->m6b) | 0.007000 | no TS |
0.010000 |
hsa-miR-5006-3p |
caaaatgtcAGGGAAAact |
0 | UUUCCCUU | m7a | (m7a->m6b) | 0.014000 | no TS | No effect |
hsa-miR-670 |
caaaatgTCAGGGAaaact |
2 |
GUCCCUGA | m7b | Disrupted | -0.175000 | -0.107000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163575993C>T | COSN15605264 | C0062T | [kidney][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1271-5p |
acttacTGCCAAatgatta |
12 |
CUUGGCAC | m6b | Disrupted | -0.111000 | -0.084000 | No effect |
hsa-miR-34a-5p |
acttACTGCCAaatgatta |
2 |
UGGCAGUG | m7a | Disrupted | -0.059000 | no TS |
0.010000 |
hsa-miR-34c-5p |
acttACTGCCaaatgatta |
2 |
AGGCAGUG | m6b | Disrupted | -0.062000 | no TS |
0.010000 |
hsa-miR-374b-3p |
acttaCTGCTAAatgatta |
18 |
CUUAGCAG | m7b | Created | -0.016000 | -0.105000 | No effect |
hsa-miR-4274 |
acttACTGCTaaatgatta |
21 |
CAGCAGUC | m6b | Created | -0.255000 | -0.297000 | No effect |
hsa-miR-449a |
acttACTGCCAaatgatta |
2 |
UGGCAGUG | m7a | Disrupted | -0.062000 | no TS | No effect |
hsa-miR-449b-5p |
acttACTGCCaaatgatta |
2 |
AGGCAGUG | m6b | Disrupted | -0.062000 | no TS |
0.010000 |
hsa-miR-4519 |
acttACTGCTaaatgatta |
21 |
CAGCAGUG | m6b | Created | -0.069000 | -0.097000 | No effect |
hsa-miR-4524a-5p |
acttaCTGCTAaatgatta |
18 |
AUAGCAGC | m6b | Created | -0.282000 | -0.317000 | No effect |
hsa-miR-4524b-5p |
acttaCTGCTAaatgatta |
18 |
AUAGCAGC | m6b | Created | -0.251000 | -0.289000 | No effect |
hsa-miR-548au-3p |
acttACTGCCAaatgatta |
2 |
UGGCAGUU | m7a | Disrupted | -0.071000 | no TS | No effect |
hsa-miR-5696 |
acttactgcTAAATGAtta |
10 |
CUCAUUUA | m7b | (m6c->m7b) | 1.418000 | 1.530000 | No effect |
hsa-miR-579 |
acttactgcCAAATGAtta |
14 |
UUCAUUUG | m7b | (m7b->m6c) | 1.248000 | 1.166000 | No effect |
hsa-miR-644b-3p |
acttactgcCAAATGAtta |
14 |
UUCAUUUG | m7b | (m7b->m6c) | 1.213000 | 1.121000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163576246A>G | COSN2151777 | RK015_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-145-3p |
caatgtGGAATCaaactgg |
8 |
GGAUUCCU | m6b | Disrupted | 0.015000 | -0.018000 |
0.010000 |
hsa-miR-3692-3p |
caaTGTGGAAtcaaactgg |
11 |
GUUCCACA | m7b | (m7b->m6b) | -0.216000 | -0.218000 | No effect |
hsa-miR-145-3p |
caatgtGGAATCaaactgg |
8 |
GGAUUCCU | m6b | Disrupted | 0.015000 | -0.018000 |
0.010000 |
hsa-miR-3692-3p |
caaTGTGGAAtcaaactgg |
11 |
GUUCCACA | m7b | (m7b->m6b) | -0.216000 | -0.218000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163576415C>A | COSN9311781 | 8051717 | [pancreas][NS][carcinoid-endocrine_tumour][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-192-3p |
ttgcctcttATTGGCAaaa |
4 |
CUGCCAAU | m7b | (m6c->m7b) | -0.156000 | -0.187000 |
-0.010000 |
hsa-miR-4480 |
ttgcctcttCTTGGCaaaa |
9 |
AGCCAAGU | m6b | Disrupted | 0.029000 | 0.041000 | No effect |
hsa-miR-5197-3p |
ttgcCTCTTCTTggcaaaa |
21 |
AAGAAGAG | m8a | Disrupted | 0.267000 | 0.168000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163576569A>T | COSN15433044 | AOCS-150-8-X | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-140-3p |
ttaCTGTGGTAattgtgta |
2 |
UACCACAG | m8a | Created | -0.103000 | -0.248000 |
-0.040000 |
hsa-miR-3692-3p |
ttacTGTGGAAattgtgta |
11 |
GUUCCACA | m7b | Disrupted | -0.216000 | -0.218000 |
1.710000 |
hsa-miR-4275 |
ttactgtgGTAATTGtgta |
0 | CCAAUUAC | m7b | Created | 0.194000 | 0.255000 |
-2.640000 |
hsa-miR-140-3p |
ttaCTGTGGTAattgtgta |
2 |
UACCACAG | m8a | Created | -0.103000 | -0.248000 |
-0.040000 |
hsa-miR-3692-3p |
ttacTGTGGAAattgtgta |
11 |
GUUCCACA | m7b | Disrupted | -0.216000 | -0.218000 |
1.710000 |
hsa-miR-4275 |
ttactgtgGTAATTGtgta |
0 | CCAAUUAC | m7b | Created | 0.194000 | 0.255000 |
-2.640000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163576576G>A | COSN7698119 | 8016470 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-let-7a-3p |
ggaaaTTGTATAtatatat |
0 | CUAUACAA | m7b | Created | 0.153000 | 0.176000 | No effect |
hsa-let-7b-3p |
ggaaaTTGTATAtatatat |
0 | CUAUACAA | m7b | Created | 0.190000 | 0.222000 | No effect |
hsa-let-7f-1-3p |
ggaaaTTGTATAtatatat |
0 | CUAUACAA | m7b | Created | 0.126000 | 0.158000 | No effect |
hsa-miR-1185-1-3p |
ggaaattgTGTATATatat |
10 |
AUAUACAG | m7a | Disrupted | 0.514000 | 0.514000 | No effect |
hsa-miR-1185-2-3p |
ggaaattgTGTATATatat |
10 |
AUAUACAG | m7a | Disrupted | 0.534000 | 0.534000 | No effect |
hsa-miR-466 |
ggaaatTGTGTATatatat |
18 |
AUACACAU | m7a | Disrupted | -0.001000 | -0.001000 | No effect |
hsa-miR-4666a-3p |
ggaaATTGTATatatatat |
16 |
CAUACAAU | m7b | Created | 0.014000 | 0.124000 | No effect |
hsa-miR-4731-3p |
ggaaaTTGTGTatatatat |
1 |
CACACAAG | m6b | Disrupted | -0.018000 | -0.055000 | No effect |
hsa-miR-4789-5p |
ggaaattGTGTATAtatat |
0 | GUAUACAC | m7b | Disrupted | 0.233000 | 0.253000 | No effect |
hsa-miR-5011-5p |
ggaaattgTATATATAtat |
10 |
UAUAUAUA | m8a | Created | 3.734000 | 3.866000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163576967T>A | COSN6312183 | RK308_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4477a |
tatctTTAATAaatggtac |
19 |
CUAUUAAG | m6b | Disrupted | 1.105000 | 0.938000 | No effect |
hsa-miR-4729 |
tatctttaATAAATGgtac |
10 |
UCAUUUAU | m7b | Disrupted | 1.087000 | 0.978000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163577101T>- | cosmic_v64_1870281 | NA | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1 |
aaaaaatCATTCCAgtag |
0 | UGGAAUGU | m7a | Created | 0.059000 | 0.081000 | No effect |
hsa-miR-206 |
aaaaaatCATTCCAgtag |
0 | UGGAAUGU | m7a | Created | 0.059000 | 0.081000 |
-0.010000 |
hsa-miR-3673 |
aaaaaatCATTCCAgtag |
0 | AUGGAAUG | m7b | Created | 0.138000 | 0.105000 | No effect |
hsa-miR-5093 |
aaaaaatCATTTCCagtag |
0 | AGGAAAUG | m7b | Disrupted | 0.053000 | no TS | No effect |
hsa-miR-875-3p |
aaaaaatcaTTTCCAGtag |
0 | CCUGGAAA | m7b | (m7b->m6c) | 0.128000 | 0.132000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163578005A>C | COSN8795414 | SS6003149 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163578227A>G | COSN2151779 | RK027_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-323a-3p |
gatatTAATGTaaaggtta |
0 | CACAUUAC | m6b | Created | 0.260000 | 0.224000 | No effect |
hsa-miR-656 |
gatatTAATATaaaggtta |
1 |
AAUAUUAU | m6b | Disrupted | 0.143000 | 0.122000 |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.163578405A>C | COSN4954041 | SS6003308 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3662 |
tgaaacctgCATTTTagtg |
20 |
GAAAAUGA | m6b | Created | 1.237000 | 1.304000 | No effect |
hsa-miR-3665 |
tgaaACCTGCattttagtg |
8 |
AGCAGGUG | m6b | Created | -0.017000 | -0.184000 |
-0.580000 |
hsa-miR-506-5p |
tgaaaCCTGAATtttagtg |
18 |
UAUUCAGG | m7b | Disrupted | -0.251000 | -0.065000 |
0.420000 |
hsa-miR-657 |
tgaAACCTGCattttagtg |
8 |
GGCAGGUU | m7b | (m6b->m7b) | -0.113000 | -0.506000 |
-0.530000 |
hsa-miR-3662 |
tgaaacctgCATTTTagtg |
20 |
GAAAAUGA | m6b | Created | 1.237000 | 1.304000 | No effect |
hsa-miR-3665 |
tgaaACCTGCattttagtg |
8 |
AGCAGGUG | m6b | Created | -0.017000 | -0.184000 |
-0.580000 |
hsa-miR-506-5p |
tgaaaCCTGAATtttagtg |
18 |
UAUUCAGG | m7b | Disrupted | -0.251000 | -0.065000 |
0.420000 |
hsa-miR-657 |
tgaAACCTGCattttagtg |
8 |
GGCAGGUU | m7b | (m6b->m7b) | -0.113000 | -0.506000 |
-0.530000 |