SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001206559 |
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Gene Symbol: | POLR1D |
Description: | Homo sapiens polymerase (RNA) I polypeptide D, 16kDa (POLR1D), transcript variant 3, mRNA. |
Gene Location: | chr13(+):28194879-28241559 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr13:g.27666031G>A | COSN6225451 | RK207_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1202 |
cctgaGCTGGCAgggcaaa |
0 | GUGCCAGC | m7b | Disrupted | -0.195000 | no TS |
0.730000 |
hsa-miR-146b-3p |
cctgagctgACAGGGCAaa |
2 |
UGCCCUGU | m8a | (m7b->m8a) | -0.192000 | -0.453000 |
-1.080000 |
hsa-miR-3173-5p |
cctgagctgGCAGGGCAaa |
2 |
UGCCCUGC | m8a | (m8a->m7b) | -0.447000 | -0.168000 |
5.720000 |
hsa-miR-3194-5p |
cctgaGCTGGCagggcaaa |
0 | GGCCAGCC | m6b | Disrupted | -0.159000 | no TS |
4.550000 |
hsa-miR-339-5p |
cctgagctGACAGGGcaaa |
0 | UCCCUGUC | m7b | Created | no TS | -0.241000 |
-1.980000 |
hsa-miR-3972 |
cctgaGCTGGCAGggcaaa |
0 | CUGCCAGC | m8a | Disrupted | -0.205000 | no TS |
5.430000 |
hsa-miR-4267 |
cctGAGCTGGcagggcaaa |
0 | UCCAGCUC | m7b | (m7b->m6b) | -0.173000 | no TS | No effect |
hsa-miR-4722-3p |
cctgagcTGGCAGGgcaaa |
2 |
ACCUGCCA | m7b | Disrupted | -0.146000 | no TS |
5.680000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr13:g.27666643A>G | COSN5723363 | HX32T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-23a-5p |
gctttaaaaGGAACCCtca |
0 | GGGGUUCC | m7b | (m6c->m7b) | no TS | -0.213000 |
-4.370000 |
hsa-miR-23b-5p |
gctttaaaaGGAACCCtca |
0 | UGGGUUCC | m7b | (m6c->m7b) | no TS | -0.250000 |
-4.630000 |