SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_007195 |
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Gene Symbol: | POLI |
Description: | Homo sapiens polymerase (DNA directed) iota (POLI), mRNA. |
Gene Location: | chr18(+):51795848-51824604 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr18:g.54295046A>G | COSN6127545 | RK136_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4724-5p |
ggccGTTCAGTaaacattg |
2 |
AACUGAAC | m7b | Created | 0.107000 | -0.053000 |
-0.600000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr18:g.54296322C>T | COSN6127546 | RK308_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3678-5p |
gagaaTGTACGGgctatgt |
1 |
UCCGUACA | m7b | Disrupted | -0.159000 | no TS |
3.990000 |
hsa-miR-3940-3p |
gagaatgtaCGGGCTatgt |
1 |
CAGCCCGG | m6b | Disrupted | -0.131000 | no TS |
3.860000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr18:g.54297251T>A | COSN6127547 | RK176_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-15a-5p |
gatgctttcTGCTGCTttc |
2 |
UAGCAGCA | m7b | (m7b->m6c) | -0.090000 | no TS |
0.090000 |
hsa-miR-15b-5p |
gatgctttcTGCTGCTttc |
2 |
UAGCAGCA | m7b | (m7b->m6c) | -0.100000 | no TS |
0.060000 |
hsa-miR-16-5p |
gatgctttcTGCTGCTttc |
2 |
UAGCAGCA | m7b | (m7b->m6c) | -0.100000 | no TS |
0.020000 |
hsa-miR-195-5p |
gatgctttcTGCTGCTttc |
2 |
UAGCAGCA | m7b | (m7b->m6c) | -0.109000 | no TS |
0.030000 |
hsa-miR-424-5p |
gatgctttcTGCTGCTttc |
2 |
CAGCAGCA | m7b | (m7b->m6c) | -0.100000 | no TS |
0.400000 |
hsa-miR-4766-5p |
gatgCTTTCAGctgctttc |
0 | UCUGAAAG | m7b | Created | no TS | 0.053000 | No effect |
hsa-miR-497-5p |
gatgctttcTGCTGCTttc |
2 |
CAGCAGCA | m7b | (m7b->m6c) | -0.053000 | no TS |
0.050000 |
hsa-miR-646 |
gatgctttcAGCTGCTTtc |
0 | AAGCAGCU | m8a | (m7b->m8a) | no TS | -0.079000 |
-0.500000 |
hsa-miR-922 |
gatgcttTCTGCTGCtttc |
1 |
GCAGCAGA | m8a | Disrupted | -0.083000 | no TS | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr18:g.54297772C>G | COSN8550485 | tumor_4163639 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |