| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_020360 |
|---|---|
| Gene Symbol: | PLSCR3 |
| Description: | Homo sapiens phospholipid scramblase 3 (PLSCR3), transcript variant w, mRNA. |
| Gene Location: | chr17(-):7293046-7298162 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr17:g.7389899T>C | COSN1201155 | HCC82T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1184 |
atcaacaGCTGCAGGggga |
0 | CCUGCAGC | m8a | Disrupted | -0.204000 | no TS |
11.810000 |
| hsa-miR-1301 |
atcaacAGCTGCAggggga |
3 |
UUGCAGCU | m7b | Disrupted | -0.267000 | -0.125000 |
2.870000 |
| hsa-miR-4687-3p |
atcAACAGCCgcaggggga |
0 | UGGCUGUU | m7b | (m6c->m7b) | no TS | -0.124000 |
-3.590000 |
| hsa-miR-5047 |
atcaacAGCTGCAggggga |
3 |
UUGCAGCU | m7b | Disrupted | -0.257000 | -0.134000 |
0.450000 |
| hsa-miR-1184 |
atcaacaGCTGCAGGggga |
0 | CCUGCAGC | m8a | Disrupted | -0.204000 | no TS |
11.810000 |
| hsa-miR-1301 |
atcaacAGCTGCAggggga |
3 |
UUGCAGCU | m7b | Disrupted | -0.267000 | -0.125000 |
2.870000 |
| hsa-miR-4687-3p |
atcAACAGCCgcaggggga |
0 | UGGCUGUU | m7b | (m6c->m7b) | no TS | -0.124000 |
-3.590000 |
| hsa-miR-5047 |
atcaacAGCTGCAggggga |
3 |
UUGCAGCU | m7b | Disrupted | -0.257000 | -0.134000 |
0.450000 |
| hsa-miR-1184 |
atcaacaGCTGCAGGggga |
0 | CCUGCAGC | m8a | Disrupted | -0.204 | no TS |
11.81 |
| hsa-miR-1301 |
atcaacAGCTGCAggggga |
0 | UUGCAGCU | m7b | Disrupted | -0.267 | -0.125 |
2.87 |
| hsa-miR-4687-3p |
atcAACAGCCgcaggggga |
0 | UGGCUGUU | m7b | (m6c->m7b) | no TS | -0.124 |
-3.59 |
| hsa-miR-5047 |
atcaacAGCTGCAggggga |
0 | UUGCAGCU | m7b | Disrupted | -0.257 | -0.134 |
0.45 |