SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_015157
Gene Symbol: PHLDB1
Description: Homo sapiens pleckstrin homology-like domain, family B, member 1 (PHLDB1), transcript variant 2, mRNA.
Gene Location: chr11(+):118477212-118528741
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.118656851A>G COSN6531345 ICGC_MB132 [central_nervous_system][brain][primitive_neuroectodermal_tumour-medulloblastoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-5008-3p cagAGCACAGctggggctt
 0 CCUGUGCU m7b (m6b->m7b) no TS -0.149000 -0.510000

Mutation Mutation ID Sample Name Cancer Type
chr11:g.118656998C>G 0_375 Small cell lung cancer
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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