| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_001256429 |
|---|---|
| Gene Symbol: | PDLIM5 |
| Description: | Homo sapiens PDZ and LIM domain 5 (PDLIM5), transcript variant 2, mRNA. |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr4:g.94456803A>G | COSN7849024 | 8050103 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3667-5p |
ttttgtgccGGTCTTacca |
0 | AAAGACCC | m6b | Created | no TS | -0.105000 |
-7.900000 |
| hsa-miR-4432 |
ttttgtgccAGTCTTacca |
0 | AAAGACUC | m6b | Disrupted | -0.064000 | no TS |
1.210000 |
| hsa-miR-4463 |
ttttgtgCCAGTCTtacca |
0 | GAGACUGG | m7b | Disrupted | -0.177000 | no TS |
0.140000 |
| hsa-miR-4499 |
ttttgtgcCAGTCTTacca |
0 | AAGACUGA | m7a | Disrupted | NA | NA |
2.130000 |
| hsa-miR-499a-5p |
ttttgtgccAGTCTTAcca |
0 | UUAAGACU | m7b | (m7b->m6c) | -0.063000 | no TS |
0.250000 |
| hsa-miR-548ao-3p |
ttttgtgcCGGTCTTacca |
0 | AAAGACCG | m7b | Created | no TS | -0.351000 |
-5.140000 |