SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001145373
Gene Symbol: OTUD1
Description: Homo sapiens OTU domain containing 1 (OTUD1), mRNA.
Gene Location: chr10(+):23728197-23731310
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.23442012C>G COSN6066087 RK175_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-5186 aaaatCAATCTCattgcca
 1
 AGAGAUUG m7b Disrupted -0.309000 no TS 6.610000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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