SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_001004698
Gene Symbol: OR2W5
Description: Homo sapiens olfactory receptor, family 2, subfamily W, member 5 (OR2W5), mRNA.
Gene Location: chr1(+):247654369-247655711
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.247492182G>A COSN7214583 8033471 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1224-3p cgcgGGTGGGaaaatgctt
0 CCCCACCU m6b Disrupted -0.187000 no TS 2.780000
hsa-miR-1260a cgcgGGTGGGAaaatgctt
0 AUCCCACC m7b Disrupted -0.416000 no TS -2.280000
hsa-miR-1260b cgcgGGTGGGAaaatgctt
0 AUCCCACC m7b Disrupted -0.416000 no TS 0.050000
hsa-miR-1280 cgcgGGTGGGAaaatgctt
0 UCCCACCG m7a Disrupted -0.206000 no TS -4.510000
hsa-miR-188-3p cgcggGTGGGAaaatgctt
2
CUCCCACA m6b Disrupted -0.150000 no TS -0.040000
hsa-miR-3156-3p cgcggGTGGGAaaatgctt
2
CUCCCACU m6b Disrupted -0.153000 no TS -5.880000
hsa-miR-3692-3p cgcggGTGGAAaaatgctt
0 GUUCCACA m6b Created no TS -0.106000 -0.040000
hsa-miR-4446-5p cgcgggtGGGAAAatgctt
1
AUUUCCCU m6b Disrupted -0.060000 no TS -2.230000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Genome Browser