SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_022150 |
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Gene Symbol: | NPVF |
Description: | Homo sapiens neuropeptide VF precursor (NPVF), mRNA. |
Gene Location: | chr7(-):25264190-25268105 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr7:g.25224797A>T | COSN1347692 | HCC6T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4775 |
taataaaaAAAATTAAaca |
0 | UUAAUUUU | m8a | Disrupted | -0.042000 | 0.005000 |
1.890000 |
hsa-miR-590-3p |
taataaaaAAAATTAaaca |
0 | UAAUUUUA | m7a | Disrupted | 0.104000 | 0.053000 | No effect |
hsa-miR-944 |
taataaaAATAATTaaaca |
0 | AAAUUAUU | m7b | Created | no TS | -0.087000 |
-4.450000 |
hsa-miR-4775 |
taataaaaAAAATTAAaca |
0 | UUAAUUUU | m8a | Disrupted | -0.042 | 0.005 |
1.89 |
hsa-miR-590-3p |
taataaaaAAAATTAaaca |
0 | UAAUUUUA | m7a | Disrupted | 0.104 | 0.053 | No effect |
hsa-miR-944 |
taataaaAATAATTaaaca |
0 | AAAUUAUU | m7b | Created | no TS | -0.087 |
-4.45 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr7:g.25224851A>G | COSN5654823 | RK090_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3909 |
agacAGAGGACcctcctca |
0 | UGUCCUCU | m7b | Disrupted | -0.141000 | no TS |
-0.200000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr7:g.25225070T>G | cosmic_v64_1675361 | Melanoma | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |