SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_002463 |
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Gene Symbol: | MX2 |
Description: | Homo sapiens myxovirus (influenza virus) resistance 2 (mouse) (MX2), mRNA. |
Gene Location: | chr21(+):42733949-42780869 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr21:g.41408685G>A | COSN7146721 | 8068564 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-136-5p |
taagtgATGGAGatacctg |
3 |
ACUCCAUU | m6b | Disrupted | -0.099000 | no TS |
0.010000 |
|
hsa-miR-141-5p |
taagtgatGAAGATacctg |
0 | CAUCUUCC | m6b | Created | no TS | -0.037000 |
-4.610000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr21:g.41408687G>A | COSN7146722 | 8068564 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-136-5p |
agtgATGGAGatacctgag |
3 |
ACUCCAUU | m6b | Disrupted | -0.099000 | no TS |
0.010000 |
hsa-miR-4678 |
agtgatggaAATACCTgag |
0 | AAGGUAUU | m7b | (m6c->m7b) | no TS | -0.122000 |
-0.450000 |
Location | SNP ID | Ancestral Allele |
Allele | miR ID | Conservation | miRSite | FuncClass | Validation | context+ score change |
---|---|---|---|---|---|---|---|---|---|
41408683 | rs76385948 | T | T |
hsa-miR-136-5p hsa-miR-6884-3p |
3 2 |
aagtgATGGAGAt aaGTGATGGAgat |
Disrupted Disrupted |
N N |
-0.099 -0.331 |
C |
hsa-miR-3605-3p |
3 |
aagtgACGGAGAt |
Created |
N |
-0.204 |